Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2449 ATGCACCTATTTTGCAGAAGTTACAAGTGGACAGACAGCCCAACTACCATCCTACCCACTATCAAGTATCTAATAGCTTGTGGAATTAGATTGTGGATATACAGTGGAGACACAGATGCAGTGTCGTCGGTGACATCTTCAAGGTACTCAATCAACACCCTCAAGCTACCTATTCTGGTTCCTTGGCGTCCATGGTACTCTGGAAAGGAGGTAGGAGGATATGTTGTGGCATACAAGGGAGTAATATTTGTGACTGTAAGAGGAGCTGGGCATATGGTCCCCAGTTGGCAACCAGCAAGGGCCCTAGCTCTTATCACATCGTTTCTTAAGAAAGCTCTACCTCCTTCTTCACCTTGGTCGTCTACTGCTAAGGCCCCACCACCAAACTTCCACTGA 396 0.4697 MHLFCRSYKWTDSPTTILPTIKYLIACGIRLWIYSGDTDAVSSVTSSRYSINTLKLPILVPWRPWYSGKEVGGYVVAYKGVIFVTVRGAGHMVPSWQPARALALITSFLKKALPPSSPWSSTAKAPPPNFH 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2449 131 SUPERFAMILY alpha/beta-Hydrolases 10 111 IPR029058 -
Glsi10g2449 131 FunFam Carboxypeptidase 17 111 - -
Glsi10g2449 131 Pfam Serine carboxypeptidase 11 110 IPR001563 GO:0004185|GO:0006508
Glsi10g2449 131 Gene3D - 17 110 - -
Glsi10g2449 131 ProSitePatterns Serine carboxypeptidases, histidine active site. 81 98 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2449 Glsi-ChrGlsi10 23481140 23482810 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2449 28 109 Calmodulin-binding Proteins AT2G22960 30.120 2.66e-09 51.2