Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2446 ATGAAGGAATTTGTTCTTTATCCTTGTGTACTATTCCATGTCAGTCTTTTTGCTTTGCTTTCCCATACCAAAGCCAATCAGGCAGATAATCTTGATGAGTTAATCCAGTCCAGGAGATCAGAAAAGCTTCCTCTAACACTTTCTTGGGAAGAGGAGGATATGTCCAAAGAGCATTCTTCAGTTTATGTTTCAATCCAAGAGGGGCTAAGACAGGCTGACAAGATTTCTGCATTGCCTGGCCAGCCTTATGGGGTGAATTTTGATCAGTATGCAGGCTATGTCACAGTTGATCCAAAGGCTGGAAGAGCTCATTTCTATTATTTTGTGGAGTCTCCTCAAAACTCTTCAACTAAACCCTTGGTGTTGTGGCTCAATGGAGGGCCAGGTTGTTCCTCATTTGGGTATGGGGCCATGGAGGAACTGGGACCCTTCAGAGTCAACTCTGATGGAAAAACACTATTCCGTAACAAATATGCTTGGAACAATGTGGCAAATGTACTGTTCTTGGAATCCCCTGCTGGAGTGGGGTTTTCCTACTCAAATACTACTTCTGACTATGACAGAGCAGGCGATAAGAATACGGCTAATGACGCCTATGTCTTTCTAATCAACTGGCTACAGAGGTTTCCACAATACAAATCTAGAGATTTTCTCATAACCGGAGAGAGCTATGCTGGTCATTACGTGCCTCAGCTCGCTTACACCATTTTGGTCCACAATAAACTCCAAAACCAAACCATTATTAACCTCAAAGGCATCGCTATAGGGAATGCATTGATAGATGCTGCTACATATACAAAGGGACTATTTGATTACTTATGGACTCATGCTCTGAACTCAGACGAAACGCACGAAGCCATTGATAAGTTCTGTGACTTTGCCTCTAGAAATTTTTCTGACGAATGTGTTAACTCAACAAGAAGGGCCCTCACGGAGAAGGGAAACATAGATTTTTATAACATTTATGCTCCACTTTGCCATGACTCTTCCCTCAGAAATGGCTCTACTGGTTCTGTTTATGATTTTGATCCCTGCACTGACAATTATGTGAAAGCCTATCTAAATAACCCAGAGGTCCAGCTAGCTCTTCATGCAAAACCCACAAATTGGAGCCATTGCAGAAGTTATAACTGGACAGACCGCCCAATTACCATCCTACCCACCATCAAGTATCTAATAGCAAGAGGCATTAGATTGTGGATATACAGTGGGGACACAGATGCACGTCTGCCAGTGACATCTTCTAGGTACTCAATCAACACCCTCAAGCTACCTATTCTGGTTCCTTGGCGTCCATGGTACTCCGGAAATGAGGTAGGTGGATATGTTGTGGCGTACAAGGGAGTAATATTTGTGACAGTAAGAGGAGCTGGGCATACAGTTCCTAGTTGGCAACCAGCAAGGGCCCTAACTCTCATCTCATCATTCCTTAAGAAAGCTCTACCTCCTTCTTCACCATGGCCTTCTACTGCTAAGGCCCCACCACCAAACTTCCACTGA 1500 0.4373 MKEFVLYPCVLFHVSLFALLSHTKANQADNLDELIQSRRSEKLPLTLSWEEEDMSKEHSSVYVSIQEGLRQADKISALPGQPYGVNFDQYAGYVTVDPKAGRAHFYYFVESPQNSSTKPLVLWLNGGPGCSSFGYGAMEELGPFRVNSDGKTLFRNKYAWNNVANVLFLESPAGVGFSYSNTTSDYDRAGDKNTANDAYVFLINWLQRFPQYKSRDFLITGESYAGHYVPQLAYTILVHNKLQNQTIINLKGIAIGNALIDAATYTKGLFDYLWTHALNSDETHEAIDKFCDFASRNFSDECVNSTRRALTEKGNIDFYNIYAPLCHDSSLRNGSTGSVYDFDPCTDNYVKAYLNNPEVQLALHAKPTNWSHCRSYNWTDRPITILPTIKYLIARGIRLWIYSGDTDARLPVTSSRYSINTLKLPILVPWRPWYSGNEVGGYVVAYKGVIFVTVRGAGHTVPSWQPARALTLISSFLKKALPPSSPWPSTAKAPPPNFH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2446 499 Gene3D alpha/beta hydrolase 70 328 IPR029058 -
Glsi10g2446 499 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Glsi10g2446 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 449 466 IPR033124 GO:0004185
Glsi10g2446 499 FunFam Carboxypeptidase 341 481 - -
Glsi10g2446 499 Pfam Serine carboxypeptidase 79 478 IPR001563 GO:0004185|GO:0006508
Glsi10g2446 499 Gene3D - 345 378 - -
Glsi10g2446 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 466 IPR001563 GO:0004185|GO:0006508
Glsi10g2446 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Glsi10g2446 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Glsi10g2446 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Glsi10g2446 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Glsi10g2446 499 FunFam Carboxypeptidase 69 328 - -
Glsi10g2446 499 Gene3D - 385 478 - -
Glsi10g2446 499 FunFam Carboxypeptidase 385 479 - -
Glsi10g2446 499 SUPERFAMILY alpha/beta-Hydrolases 73 479 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2446 Glsi-ChrGlsi10 23310429 23317321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2446 350 477 Calmodulin-binding Proteins AT2G22960 29.323 9.70e-13 65.1