Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2442 ATGAAGGAATTTGTTCTTTATCCTTGTGTACTATTCCATGTCAGTCTTTTTGCTTTGCTTTCCCATACCAAAGCCAATCAGGCAGATAATCTTGATGAGTTAATCCAGTCCAGGAGATCAGAAAAGCTTCCTCTAACACTTTCTTGGGAAGAGGAGGATATGTCCAAAGAGCATTCTTCAGTTTATGTTTCAACCCAAGAGGGGCTAAGACAGGCTGACAAGATTTCTGCATTGCCTGGCCAGCCTTATGGGGTGAATTTTGATCAGTATGCAGGCTATGTCACAGTTGATCCAAAGGCTGGAAGAGCTCATTTCTATTATTTTGTGGAGTCTCCTCAAAACTCTTCAACTAAACCCTTGGTGTTGTGGCTCAATGGAGGTTGTTCCTCATTTGGGTATGGGGCCATGGAGGAACTGGGACCCTTCAGAGTCAACTCTGATGGAAAAACACTATTCCGTAACAAATATGCTTGGAACAATGGTTGTTCCTCATTTGGGTATGGGGCCATGGAGGAACTGGGACCCTTCAGAGTCAACTCTGATGGAAAAACACTATTCCGTAACAAATATGCTTGGAACAATGTGGCAAATGTACTGTTCTTGGAATCCCCTGCTGGAGTGGGGTTTTCCTACTCAAAAACTACTTCTGACTATGACAGAGCAGGCGATAAGAATACGGCTAATGACGCCTATGTCTTTCTAATCAACTGGCTACAGAGGTTTCCACAATACAAATCTAGAGATTTTCTCATAACCGGAGAGAGCTATGCTGGTCATTACGTGCCTCAGCTCGCTTACACCATTTTGGTCCACAATAAACTCCAAAACCAAACCATTATTAACCTCAAAGGCATCGCTATAGGGAATGCATTGATAGATGCTGCTACATATACAAAGGGACTATTTGATTACTTATGGACTCATGCTCTGAACTCAGACGAAACGCACGAAGCCATTGATAAGTTCTGTGACTTTGCCTCTAGAAATTTTTCTGACGAATGTGTTAACTCAACAAGAAGGGCCCTCACGGAGAAGGGAAACATAGATTTTTATAACATTTATGCTCCACTTTGCCATGACTCTTCCCTCAGAAATGGCTCTACTGGTTCTGTTTATGATTTTGATCCCTGCACTGACAATTATGTGAAAGCCTATCTAAATAACCCAGAGGTCCAGCTAGCTCTTCATGCAAAACCCACAAATTGGAGCCATTGCAGTGGGGACACAGATGCACGTCTGCCAGTGACATCTTCTAGGTACTCAATCAACACCCTCAAGCTACCTATTCTGGTTCGTTGGCGTCCATGGTACTCCGGAAATGAGGTAGGTGGATATGTTGTGGCGTACAAGGGAGTAATATTTGTGACAGTAAGAGGAGCTGGGCATACAGTTCCTAGTTGGCAACCAGCAAGGGCCCTAACTCTCATCTCATCATTCCTTAAGAAAGCTCTACCTCCTTCTTCACCATGGCCTTCTACTGCTAAGGCCCCACCACCAAACTTCCACTGA 1509 0.4387 MKEFVLYPCVLFHVSLFALLSHTKANQADNLDELIQSRRSEKLPLTLSWEEEDMSKEHSSVYVSTQEGLRQADKISALPGQPYGVNFDQYAGYVTVDPKAGRAHFYYFVESPQNSSTKPLVLWLNGGCSSFGYGAMEELGPFRVNSDGKTLFRNKYAWNNGCSSFGYGAMEELGPFRVNSDGKTLFRNKYAWNNVANVLFLESPAGVGFSYSKTTSDYDRAGDKNTANDAYVFLINWLQRFPQYKSRDFLITGESYAGHYVPQLAYTILVHNKLQNQTIINLKGIAIGNALIDAATYTKGLFDYLWTHALNSDETHEAIDKFCDFASRNFSDECVNSTRRALTEKGNIDFYNIYAPLCHDSSLRNGSTGSVYDFDPCTDNYVKAYLNNPEVQLALHAKPTNWSHCSGDTDARLPVTSSRYSINTLKLPILVRWRPWYSGNEVGGYVVAYKGVIFVTVRGAGHTVPSWQPARALTLISSFLKKALPPSSPWPSTAKAPPPNFH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2442 502 Gene3D - 408 483 - -
Glsi10g2442 502 Gene3D alpha/beta hydrolase 161 360 IPR029058 -
Glsi10g2442 502 SUPERFAMILY alpha/beta-Hydrolases 161 482 IPR029058 -
Glsi10g2442 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 74 159 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 188 200 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 237 262 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 201 211 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 FunFam Carboxypeptidase 392 482 - -
Glsi10g2442 502 Pfam Serine carboxypeptidase 161 406 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 Pfam Serine carboxypeptidase 79 160 IPR001563 GO:0004185|GO:0006508
Glsi10g2442 502 ProSitePatterns Serine carboxypeptidases, serine active site. 251 258 IPR018202 GO:0004185
Glsi10g2442 502 FunFam Carboxypeptidase 159 360 - -
Glsi10g2442 502 SUPERFAMILY alpha/beta-Hydrolases 73 160 IPR029058 -
Glsi10g2442 502 ProSitePatterns Serine carboxypeptidases, histidine active site. 452 469 IPR033124 GO:0004185
Glsi10g2442 502 Gene3D - 377 407 - -
Glsi10g2442 502 Gene3D alpha/beta hydrolase 68 160 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2442 Glsi-ChrGlsi10 22976619 22983827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2442 406 480 Calmodulin-binding Proteins AT2G22960 31.579 2.60e-09 55.1