Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2423 ATGGACTTTCTGCAGAATCACAGGGCTGAGATGATTAGCATGGCAGTGGCTCTTGTAGCCATTGTCGGTGGTACCGCTTACTATTACTACGTTACCAAGAAGCCTAAAGGTTGTTTAGACCCTGTGAACTTCAAGGAATTTAAACTTGTTAAACGAACACAACTTAGCCATAATGTGGCCAAGTTTAGATTTGATCTTCCAACACCTACCTCGGTCTTGGGACTTCCTATTGGACAACATATCAGCTGCAGAGGGAAAGATAATCTTGGTGAAGAAGTTGTCAAACCATATACTCCAACAACGTTGGATACTGATGTTGGATACTTTGAATTAGTTATAAAGATGTATCCACAAGGAAGGATGTCTCATCATTTTCGAGAGATGCGTGAAGGTGATTACATGGCTGTGAAGGGACCAAAGGGACGCTTCAAGTACCAGCCTAATGAAGTTACAGCTTTTGGGATGCTTGCTGGTGGTACTGGCATTACCCCAATGTTTCAGGTTACAAGAGCTATACTTGAAAACCCACAGGACAAAACTAACATACATCTGATATATGCCAATGTCTCATATGATGACATTCTGTTAAAGGAAGAGCTGGATTCTTTGGCCCTCAATTTCCCAAGTCAATTCAGAGTTTATTATGTTCTAAATCAGCCACCAGAAGGATGGAATGGCGGTGTTGGATTTGTATCCAAGGAAATGATCCAAACACATTGTCCCGCACCAGCCACCAATATTAAGATATTAAGGTGCGGGCCACCTCCCATGAACAAGGCTATGGCTGCTCATCTTGATGCTCTTGGATACAGTTCTGAAATGCATGCAGTACAGCCAAGAGAGGCTTATGCAAAATTTCAGTTTTATCAACAATCGTACAATAGTTTCACCATCCAATGA 900 0.4189 MDFLQNHRAEMISMAVALVAIVGGTAYYYYVTKKPKGCLDPVNFKEFKLVKRTQLSHNVAKFRFDLPTPTSVLGLPIGQHISCRGKDNLGEEVVKPYTPTTLDTDVGYFELVIKMYPQGRMSHHFREMREGDYMAVKGPKGRFKYQPNEVTAFGMLAGGTGITPMFQVTRAILENPQDKTNIHLIYANVSYDDILLKEELDSLALNFPSQFRVYYVLNQPPEGWNGGVGFVSKEMIQTHCPAPATNIKILRCGPPPMNKAMAAHLDALGYSSEMHAVQPREAYAKFQFYQQSYNSFTIQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2423 299 FunFam NADH-cytochrome b5 reductase 136 278 - -
Glsi10g2423 299 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491
Glsi10g2423 299 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Glsi10g2423 299 PRINTS Cytochrome B5 reductase signature 154 173 - -
Glsi10g2423 299 PRINTS Cytochrome B5 reductase signature 192 203 - -
Glsi10g2423 299 PRINTS Cytochrome B5 reductase signature 131 145 - -
Glsi10g2423 299 PRINTS Cytochrome B5 reductase signature 95 102 - -
Glsi10g2423 299 PRINTS Cytochrome B5 reductase signature 73 84 - -
Glsi10g2423 299 PRINTS Cytochrome B5 reductase signature 248 256 - -
Glsi10g2423 299 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 135 273 IPR039261 -
Glsi10g2423 299 Gene3D - 135 276 IPR039261 -
Glsi10g2423 299 FunFam NADH-cytochrome b5 reductase 37 136 - -
Glsi10g2423 299 Gene3D Translation factors 35 134 - -
Glsi10g2423 299 PANTHER NADH-CYTOCHROME B5 REDUCTASE 34 275 IPR001834 GO:0016491
Glsi10g2423 299 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Glsi10g2423 299 CDD cyt_b5_reduct_like 47 274 - -
Glsi10g2423 299 SUPERFAMILY Riboflavin synthase domain-like 35 148 IPR017938 -
Glsi10g2423 299 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Glsi10g2423 299 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491
Glsi10g2423 299 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2423 Glsi-ChrGlsi10 21791901 21799640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2423 27 275 NADPH P450 reductases AT5G17770 79.920 3.42e-154 430