Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi10g2383 | ATGGGGATTCAGACAATGGGTTCTCAAGGTAATGGGCAGCAGTCACATTTACAGCCTTCTCCATTAACAAGGCAAAGCTCATGGTACAGTCTTACCCTTGATGAGGTTAAAAATCAACTAGGAGACCTGGGGAAGCCATTAGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTATGGACTGCTGAAGCAAGTAAGTCTATAGGGTTAGAAAATGAGAACATGTCGTCATCATCTTCTCTTCAACGTCAGGCTAGTCTGACCTTGGCTCGGGCTTTGAGTGGGAAGACAATTGATGATGTATGGAGAGAAATCCAACAAGGTCAGAGAAAACAGTATTCAGAAGATATAAGAGGTCCAAATAGAGAAATGACTCTTGGTGAAACGACCTTAGAGGACTTCTTGGTACAAGCAGGGCTCTTTGCTGAAGCTTCTATAAGTCCAGCTGCGGGGTTGGATATTATGGATGCCACAACCCCTCAAAGTCTTCAACACAATACAAGCTTGTCACCCTCCCCTTCAATTGGAAGTTTATCTGACACAAGACCAGGCCGGAAAAGGGATGCTCCAGATACATATGAGAAAACGTTGGAGAGGAGGCTGAGGAGGAAAATCAAGAACAGGGAATCCGCCGCTCGTTCACGGGCTAGAAAACAGGCTTACCATAATGAACTGGTTGGCAAAGTTTCCCGCCTAGAAGAAGAAAATACAAAACTCAAGAAAGAAAAGGTACAAAATCTCATTCATGCTTTGTTTTCCCCTCTATTTTGCAGTTTCTTGGACCAAGTAGTTCTTGGTGTTGTGGACATATTATTCTTGCATTCTACAATGAACCAATTACTTCAGAACATGGTCAGGAGTTTGAGAGGAGATTGGCATCCGAATCATCTTCCGAACCAACATATCAACTTCGAAGAACAAGTTCTGCCTCTTTCTGACATTGAAGTTTCAGTGTTCATAAACTTCAGCCTTGCTTTGCTGGGAAACAATATCAGGAAAGACTTGAGTCTGGTGAAAGAGTTGCCTTTTCTGTATAATGATTATCCTTGTGTGAGAGGGTATTGTAAGGGCAAAGTAACTTGTGGAGAAATGGTGTGCTCTCGAGTTATTTTCCAGAAAATGGTCCTATCACTGGTCTCTAATGGTCATTCTTTCACAGAGCTGTAG | 1167 | 0.4267 | MGIQTMGSQGNGQQSHLQPSPLTRQSSWYSLTLDEVKNQLGDLGKPLGSMNLDELLQNVWTAEASKSIGLENENMSSSSSLQRQASLTLARALSGKTIDDVWREIQQGQRKQYSEDIRGPNREMTLGETTLEDFLVQAGLFAEASISPAAGLDIMDATTPQSLQHNTSLSPSPSIGSLSDTRPGRKRDAPDTYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENTKLKKEKVQNLIHALFSPLFCSFLDQVVLGVVDILFLHSTMNQLLQNMVRSLRGDWHPNHLPNQHINFEEQVLPLSDIEVSVFINFSLALLGNNIRKDLSLVKELPFLYNDYPCVRGYCKGKVTCGEMVCSRVIFQKMVLSLVSNGHSFTEL | 388 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi10g2383 | 388 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Glsi10g2383 | 388 | Coils | Coil | 222 | 242 | - | - | |
| Glsi10g2383 | 388 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 197 | 242 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi10g2383 | 388 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 202 | 217 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi10g2383 | 388 | SMART | brlzneu | 195 | 257 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi10g2383 | 388 | MobiDBLite | consensus disorder prediction | 162 | 179 | - | - | |
| Glsi10g2383 | 388 | CDD | bZIP_plant_BZIP46 | 199 | 247 | - | - | |
| Glsi10g2383 | 388 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 197 | 250 | - | - | |
| Glsi10g2383 | 388 | MobiDBLite | consensus disorder prediction | 162 | 192 | - | - | |
| Glsi10g2383 | 388 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 22 | 244 | IPR043452 | GO:0003700|GO:0045893 | |
| Glsi10g2383 | 388 | Pfam | bZIP transcription factor | 199 | 242 | IPR004827 | GO:0003700|GO:0006355 | |
| Glsi10g2383 | 388 | SUPERFAMILY | Leucine zipper domain | 199 | 243 | IPR046347 | GO:0003700|GO:0006355 | |
| Glsi10g2383 | 388 | Gene3D | - | 197 | 250 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi10g2383 | Glsi-ChrGlsi10 | 21134914 | 21139152 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi10g2383 | 22 | 254 | bZIP Transcription Factor Family | AT3G56850 | 44.118 | 8.79e-53 | 176 |
Transcription factors information