Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2371 ATGTTTACAAATTGCAGATTTGGGGACACATCAATTACTTATTATGGGCTGGTTCAGGAAAACTTAAGTCCAGTTTTCAAGGCTAGAGATATCGAAACTGGTGAAAGTGTTGCTCTGAAGAGAATACAAGTGGAAAATGAGAAAGATGTGTTCCCTTTGACTGTTATGCGTGAAATCGAAACTCTAAAGAAATTAGATCATGATCATGTGATCAAGTTGAAAGAAGTTGTGAGATCACAGGATGATGACAAGCATAAAGTTATTTTCTATCTGGTCTTTGAATACATGGACCATGATTTGTTAGGTCTGATTGACCAGTATCAGCAAAAATTTACAGCTCCTGAAATTAAGAGTAATGTTCTTATAAACAATGAAGGTATTCTAAAGCTTGCAGATTTTGGGCTGGCAAAGTCATTTGCTAATGTCGAGAGTGGCTCAAAGCTTATAGATTGCGTCATCGCATTATGGTACAGGCTTCTAACAGGAAAGTACATTTTCCCCGGAATTAACGAGGTAGATCAAGTAAATAAAATATATGAGCTGTATGGAAAACCAGATGATGTGAATGGCCTGGGGTTTCTAAGATGCGAAGACGTCTTGGAGAAGTTTGCAAAGAGTAAGTATCACAGTATGAGCATGTGTAACCATATTTGTACAACTTTACAGAGAATTACTGCCAAGGATGCGCTTGAAGCTGAGTATTTCCGGACTGATCCATTGCCCTGTGATCGCAAGAGTCTACCCAAGTATCCCTCATCACATTATTTTAAGACAAGGAACAAGTGTGAGCGAGAAGAACAATTCACAGAAACCGTCGAGCTTCAGAGCATGCTCTCTCCAAATCAGTCAAGCTTGAGGTCACACGCCTTAGGTTTGTTAATCAAAGTATTCCAAGGATGGAATCCTCTTGGAAATCCGTCACATGGATTGGAGTTAATATCACTATGGAAAGCAGTCCTTCGAGTACAAGGTGGCCTCGATAGCTGGGATGTAGGACCATATTACGATCTATTGATTTCTAAAGCTGTATTACCAGCTGTCAGGATTTCTGGTCTCTATACCTGGCAGGCACAGGATCCTGAACCAACGTTACGGTTTATGGAGTTATGGGAAAATTGGCTTCCTCCAGTTCTTACAACCATATTGGATGAAATAGTCATGCCAAAACTGCATATTGCTCTGGCAAACACGAAGTGA 1197 0.401 MFTNCRFGDTSITYYGLVQENLSPVFKARDIETGESVALKRIQVENEKDVFPLTVMREIETLKKLDHDHVIKLKEVVRSQDDDKHKVIFYLVFEYMDHDLLGLIDQYQQKFTAPEIKSNVLINNEGILKLADFGLAKSFANVESGSKLIDCVIALWYRLLTGKYIFPGINEVDQVNKIYELYGKPDDVNGLGFLRCEDVLEKFAKSKYHSMSMCNHICTTLQRITAKDALEAEYFRTDPLPCDRKSLPKYPSSHYFKTRNKCEREEQFTETVELQSMLSPNQSSLRSHALGLLIKVFQGWNPLGNPSHGLELISLWKAVLRVQGGLDSWDVGPYYDLLISKAVLPAVRISGLYTWQAQDPEPTLRFMELWENWLPPVLTTILDEIVMPKLHIALANTK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2371 398 Gene3D Phosphorylase Kinase; domain 1 19 97 - -
Glsi10g2371 398 Pfam Protein kinase domain 23 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2371 398 Pfam GC-rich sequence DNA-binding factor-like protein 290 395 IPR022783 -
Glsi10g2371 398 Gene3D Transferase(Phosphotransferase) domain 1 116 264 - -
Glsi10g2371 398 SUPERFAMILY Protein kinase-like (PK-like) 23 242 IPR011009 -
Glsi10g2371 398 ProSiteProfiles Protein kinase domain profile. 11 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2371 398 PANTHER CELL DIVISION PROTEIN KINASE 21 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2371 Glsi-ChrGlsi10 20894497 20898773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2371 25 289 Core Cell Cycle Gene Families AT5G10270 40.000 2.64e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Glsi10g2371 GCFC 2e-16 No_clan