Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2364 ATGAATTCATGTGCATGTGATTGCGTCGATGACTGCTCCAATGCGTGCAGTGGCAAGACTTTTGGGTTGGGCCGTATTCAAGGTGCTGTTTCTCATGGTGCTGGTGATTTTCAGTTTCGGGTGTAAAATAGAATCACAGTAGGATCCATGGGTAGCATGACGACGAATGGGGGAGATGCCCCAAAATTGTCCAAAGGTCGGCGGTCGTCATTATCAATTGAAGAAGCAAGTTGCAAAAGTAATTTGGGAGGAGAGGGTCCTTTGAAGAAAGGCCCGTGGACATCGGCAGAGGATGCAATTTTGGTAGAATATGTCAAAAAGCATGGAGAAGGAAATTGGAATGCAGTGCAAAAGCACTCTGGCCTTGCCCGTTGCGGGAAAAGCTGTCGACTACGATGGGCTAATCACCTAAGACCAGACTTGAAAAAGGGTGCATTTACTCAAGAGGAAGAGCATCGAATCATTGAGCTCCATGCTAAGATGGGAAACAAATGGGCTCGAATGGCGGCAGAGTTGCCTGGACGTACAGATAATGAGATAAAGAACTATTGGAATACTAGAAGTAAGAGATTGCAACGAGCTGGCTTACCACTTTATCCTGCTGAAATTTGCCAGCGGGTATTTAAGGGCAGTCAAGAAATTTCAAATGTTGGTACGCTTATGAATGGAGCTGGCCAGCATTCTGATCTCTCACAAGCAGATAATTTTGATATCCCAGACCTGGAATTCAAAAATTTTAATTTCAGTCGAGGATATCTACCATATGGACCATCAATATTTGATATATCTGATAGCAGCATGTTTGATCAAAATGCAGGCTTATCCTATTGTAATAATATAATGTTGCCTACTATGCATCCTCCTAAACGCCTTCGGGAATCAGATATACTTTACAATAGATTGGACAGTAGTAGCAGGAGTGTGGTTCCTGTATTTGATCAGTATGTGGAATATACTTGTGAGAAACTTGCTCAGCCGCTCCAAAAGTTGTCTTCTCCATGTGATCCCAACCTTAACACCAATGATCAGTTTCATGGTGGTAACCTTCCTGGCAGCCATGCCTCTTTAAATGGCAATACCTCTTCTTCTGTGCCCACATCTGAGGCCATGAAGTTGGAGCTCCCTTCACTCCAATATGTAGAAACTCAACAAGGTAGCTGGGGCACACCTGCATCCCCACTTCCTTCCCTTGAGTCTGTTGATACATTGATTCAGTCTCCTCCAGCTGAACAGACTCAGTCTGATCCTGTTTCTCTACAGAGCTGTGGTTTGTTGGAAGCATTACTCTATGAATCAAAGCTTCCAAAAGGCTCAAATAACAATTCGTTGTGGCAGACTCCTCATAATTGCATACCAAATGAAGTAATTAGAAGTTCAACCTTGAATCCCTATGAGATAGAATGGGACGGACAACAGTACCCAAACTCTCCGTTAGGTCACTCTTCTGCATCAGTTCTTACAGATTATACTCCTCTTAGCATGTGCTCAGTTGATGACCCCCAATCAGTTGAACTCGCACAAGGTCATGATATGAAGCACGAAACAATTACACAGGGTCCATCTTTTCCTTCCAGAAAGAGAGATATTTTAAATCAGATAGACCTCACAAGGCCAGATATTTTGCTTGAGATGGGTTGGTTTGGGACTGAAACCAATTATGGCAAGGATCAATCTCTTCTTAAAGATGGTATAGATGAACTTGTCAATGAAGATTTACATGGTTATCACTAG 1731 0.4292 MNSCACDCVDDCSNACSGKTFGLGRIQGAVSHGAGDFQFRVXNRITVGSMGSMTTNGGDAPKLSKGRRSSLSIEEASCKSNLGGEGPLKKGPWTSAEDAILVEYVKKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAFTQEEEHRIIELHAKMGNKWARMAAELPGRTDNEIKNYWNTRSKRLQRAGLPLYPAEICQRVFKGSQEISNVGTLMNGAGQHSDLSQADNFDIPDLEFKNFNFSRGYLPYGPSIFDISDSSMFDQNAGLSYCNNIMLPTMHPPKRLRESDILYNRLDSSSRSVVPVFDQYVEYTCEKLAQPLQKLSSPCDPNLNTNDQFHGGNLPGSHASLNGNTSSSVPTSEAMKLELPSLQYVETQQGSWGTPASPLPSLESVDTLIQSPPAEQTQSDPVSLQSCGLLEALLYESKLPKGSNNNSLWQTPHNCIPNEVIRSSTLNPYEIEWDGQQYPNSPLGHSSASVLTDYTPLSMCSVDDPQSVELAQGHDMKHETITQGPSFPSRKRDILNQIDLTRPDILLEMGWFGTETNYGKDQSLLKDGIDELVNEDLHGYH 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2364 576 Gene3D - 89 142 - -
Glsi10g2364 576 Gene3D - 145 207 - -
Glsi10g2364 576 Pfam Myb-like DNA-binding domain 93 153 - -
Glsi10g2364 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 137 IPR017930 -
Glsi10g2364 576 FunFam MYB-related transcription factor 89 142 - -
Glsi10g2364 576 SMART sant 142 190 IPR001005 -
Glsi10g2364 576 SMART sant 89 139 IPR001005 -
Glsi10g2364 576 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Glsi10g2364 576 MobiDBLite consensus disorder prediction 377 418 - -
Glsi10g2364 576 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 138 192 IPR017930 -
Glsi10g2364 576 CDD SANT 145 186 IPR001005 -
Glsi10g2364 576 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 76 559 - -
Glsi10g2364 576 MobiDBLite consensus disorder prediction 330 369 - -
Glsi10g2364 576 MobiDBLite consensus disorder prediction 330 418 - -
Glsi10g2364 576 ProSiteProfiles Myb-like domain profile. 138 188 IPR001005 -
Glsi10g2364 576 FunFam Transcription factor GAMYB 145 191 - -
Glsi10g2364 576 CDD SANT 92 137 IPR001005 -
Glsi10g2364 576 SUPERFAMILY Homeodomain-like 88 184 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2364 Glsi-ChrGlsi10 20683378 20694499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2364 76 572 MYB Transcription Factor Family AT5G06100 40.119 4.87e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi10g2364 Myb_DNA-bind_6 3.4e-15 CL0123