Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2360 ATGTTGTCGTGCAGCGTACGTTCATCACCACCTTCTACCCACATTGTCCTCAAGAACCTGTCCTTCATAGCCAATCGCTTTGCAAACTCTGGGAAGATGTCTTCTCCCACTTCATCAAGAGTGGGGTACATATTCAGATTGGACAACAGGTCAATAGTTGGAGCAAACGAGAGGATCATCAAGATACAAGCTGCGAGGAGACAGGAAGACTACCAAAACAATAAGGAGCTTATGCAGATTTCTAAACTGTATGAATCAGAGAAGGTTGAATTCAAGATAGAATTGGTCACAGGAACCATACTTAAGGAGGTTGCTTTAAACAAAGCAATAGAACTAAATGCAACTTGGGTGATACTGGACAGGCAGATGAAGAAAGATGGAGAATACTTCCTCCAGAAGCTTTCTTGTGGTATATCAAGATTGAAGCGGAACAACAGGATTGAACATTTGAGAGGGCTTCCAGACTTCCCGTTAGAGATACAATGTAACAGTCACGAAACATATGATGACAGTGTACCAGGATGTCCAGAAGATGAGGAAACCTCCAGCGTTGAAGGTTACAACAAGGGTCAACTAAAAGGTGAACAAATTGAACAAGAAAAGATTCAAAGCAGCCCCCCTAAGGAGGAGGACCCGACATGCACTATTAAAAGGAATCAAACAATAGAACAGGAAAAACCTGATCAACTGAGAACAGGTAAAGGAGAGGCATGGAACAGCATCCAAGATGACGGGTGGGACTTCAGGCATCCAATAAATAGTAATCAAATAGAAGTTCAAACAAAAGCTGAGCTAGTGATCCAGGATCAAGAACAGATACAGATCATCTCCCATGAGGATACAAGGGATGGAAAGCAAGAAAAAAGCATTTTTGGAAAGTCAAAATTTTCTCTCTGCTCTATCTGCAAAAGTAGACGGCCAAATATTGGATGGAAAAAGGACTTCACATATAAAGAACTTCAAGTTGCCACAGATGGGTTTTCAATGATGAACTCTCTCTCTCAAGAAGAATACGGATCTATTTTCAAAGGTCAAATAGAGGGTGAGCTAAATATAGTAGTTAAGCAGCATCAACTCACAGATTCTCAAGTAGAGAAAAAAATGATGTCCGAAGTGCAATTAATCCTCAAAGCTAGACACAAGAATGTGGCCATGCTGTTGGGTTCATCTACAGAAGGAAATCAACTGCTGACTGTATATGAGTATGCATGCAATGGTTCACTAGACAAATATTTATCAAAGGAAAGTTGCAGACCATTGAGCTGGAGAGAAAGGGTAAACGTAGCAGTAGGAGTCTCCAGAGGTCTAAAATACCTACATGAGAATAACATAATTCATGGAAGTATAAAGCCAAGTAACATTCTTCTAAACCATGAGTTCGAACCAATGCTTGGAGATTTCAGCTTTGGGAAAACAAAACATGAACCAAAGAAGTCCTACAAAGACAAAAACTTAGGGAATTCTGGATACAAAGCACCAGAGTATCTGGAGAATGGGAAACTATCAACTAAGACAGATGTATATTCTTTTGGTGTGGTTCTTTTAGAGCTGATTACTGGTCAGAGAGCTACAAACAAAATATCAGGAGAGAAAAGCCTTGTTGAATGGGCAAAGCCTCTTCTAGGAGGAAAAAAGTACCCACAATTGCTTGATCCAAAAATTGGAAGTTCTTATGAAGAAGACCAACTACATTGGCTGGTCCAAGTGACCGAACAATGTCTCAGAAAGAATCCAAAGGAAAGATTAACAATGAATATGGCTGTCTCTGCATTGCAAGGCATAACAGATAACAAAGAGCACTGTATCATTGAAGACTTTTCCCCAACAATTTCAAATTCAACATGCAGCACATCAGATATAACAAGCTCACAAGCTTTGTTTCCTGAAGTAAGGAGGAGGGTCTTAATGATAACCAAATGGATAGGTCAAACAAATCCTTATCATCTGAATAAGGAAGAGTATATCAAGAGCAGCCACTATGGGCAGGAGAGGAACTCACAGCTAACAACTAAAAATAATGACATGATAGGCCATATAAATGCTGATCATCTACACCAGGATGAAAAACAGATGCAAAGCAGGTTCAATGGAGAAGAGAGGAGCTCAGAACAGATGCTTAGCGATAACCATATGATGGGTCTGACAAACAATAATCAGCTGAATAAGAATGAAGAACAGATGAACAGAAACCCCCCAGGGGAGAAGAGCTCAAGACAGAAGATTAGTAGCAGCCCCATGATAGATCAGACAAAAGTTGATCAACCAAACCAGGATCAAGAAGCACAAAGCAGTTTCATCAGAGATGAGAAACCTCTTAGTCAAACGACAGGTGAAACAAAAGCAGATATACTGAGCCATCATAATAAACAACAGAATAGAAGCTCCAATGAGAGTTTACTGGATGGGCATCAAGGAGCAATAATTTTGGATAATTCAAAATCATTTGCGTGCTCCATTTGCAAAAGTAGACGCCCAAATATTGGATGGCAAAAAGAATTCACTTACAATGAACTTGAAGCTGCTACAAATGGATTTTCAATTGAGAACTGTCTATCAGAAGGTGGAAATGGACCTGCTTTCAAAGGCGTTCTAGAGAGTAAGGTGAAAATAGTTGTTAAGAAACATCAAATCACTATCGCTCAGGAAGAGAAGATATTTATGTCAGAAGTCCAGTTGCTCACTAAAGCTATACATAAAAATGTGGTCATGCTGTTGGGTTCATGTCCAGATAGAAGTCAACTGATGATTGTGTATGAGCTTGCATGCAATGGTTCACTTGACCAGTACCTATCTAGGGGAAGTCGCCAGCCATTGACTTGGAGAGACAGGGTGAAAGTAGCAATAGGTGTCTCCAGAGGTCTAAAATACCTACATGAGATCAACATAGTTCATGGAAGTATAAAACCAAGTAACATCCTTCTAACCCATGAATTGGAACCACTGCTTGGAGATTTTGGTTTCAAAAAAGCAAAACTTGAATTAAAGAAATCTCACAAGGATAAAAATGTAAATAATTCTGAATACACAGCACCCGAGTATTTGGAAAGTGGGAAACTATCAAGTAAGACAGATGTATACTCCTTTGGTGTGGTTCTTTTAGAGCTGATCACTGGCCGAATGGCTACAGACAAATTATCGGGAGGGAAAAGTCTTGTTCAATGGGCTAAGCCCCTTCTTGGAGGAAAGAAGTACCCACAGCTGGTGGATACCAAAATCAGCAGTTCCTACAAAGAAGAGCAACTTCTATGGTTGATCCAAGTAACAGAACAATGTCTGAGAAAGAATCCTAAGGAAAGATTGACAATGAACATGGTTGTCTCTGCATTACAAGATATAGCAGATACCGATTATTTCCCAGCAATTGAAGACTCTTCTCCAGAAAAACCATATTTACCACATACTACGACTAGCTCACAAGGTCAAACAAAAGAAGATCAGCTGTGCTGGGAACAAGAACAGATTGAAAGCTGCCCCTATAGAGAGGAGAGGAACTTAAGACCAAAGATTAAAAATAATGACATAATAGGTCATAGAAAAGCTGATCAGCTGAACCAGGATGGAGAACAGATGCAGAGCAGCCCCAATGGAGAGGAGAGGAACTTAAGAGTAACGATTAGCAATAATCACAAGATAGATCAGATAAAAGCTGATAAGATGAGCAAGGATCAAGAAGACATAGAAGGCAGCCTCCAAATAGAGGAGAGGGGCTTAAGACTTGCACCTATTGGTAACCAAATTATCAATGAAAATGAAGATATAAAACAAGAGATCATCCCAGATCAAAAACAAATGCAGAGCGTCTTCCATGGGGATTCACTGGATAAGTGTAAAGCCAACATCATGTTGGAGGATTCAAAATCTGCTCTATGCTCTATCTGCAAAAGTAAACGTCCAAGTATCGGATGGCAAAAGGACTTCACTTACAAAGAACTCCTAACTGCCACTGATGAATTTTCAATTAAGAACTCTCTATCTGAAGGTGCATATGGACCCACATTCAAAGGCCAGCTACACTGTAATCTAAAAATAGTTGTTAAGAAACTTCAAATGACGAGCTCCCTGGAAGAGAAGATATACAAGTCAGAAGTCCAGTTGCTCACCAGAGCTAAACATGAAAATGTGGTCATGTTGTTGGGTTCATGCATAGAAGAAACGAAATTGCTGATTGTATATGAGAATGCATGCAATGGCGCACTTGACCAGGGGAAGCCACAGATCATTAACATGGAGAGAAAGGGTGAAAATAGCAATAGGTGCCTCCAGAGGTCTAAAGCAAAGCCACTTCTTAGAGGATGTAAGTACCCACAGTTGGTGGATCAAAATACCAGCAGTTCCTGTGATGATCAAGAACTTTTTTCATTGGTCCAAGTAACTGAAAAGTGTCTCAGAAAGAATCCCACAGAAAGGTTAACAATGAATATGGTTATCTCGGCATTGCCATGCTTAGTTGCAACTAGCTCACAAGATAATGAGGAATCACCAGCAGAAGATGACTTAAACAGAGATGTTAGTCAAGAAATTGAAAACTGTATAATTTGTAGGGGAAGTAATCAGGAAACAAATGTTAGCCAAGAGAGAATGAACCACATAACTTGTTGTGGAAGTAACAAGGAAGCACAAGAAACAGAAAGGTTAAGCCCTGAGCTGCATATTGATACATTAATGCTGTCACCATTTATAATTATGATTGATGAAACAAGAACTTCTATTATAAGCATCCAGAAAAGCTAA 4731 0.3967 MLSCSVRSSPPSTHIVLKNLSFIANRFANSGKMSSPTSSRVGYIFRLDNRSIVGANERIIKIQAARRQEDYQNNKELMQISKLYESEKVEFKIELVTGTILKEVALNKAIELNATWVILDRQMKKDGEYFLQKLSCGISRLKRNNRIEHLRGLPDFPLEIQCNSHETYDDSVPGCPEDEETSSVEGYNKGQLKGEQIEQEKIQSSPPKEEDPTCTIKRNQTIEQEKPDQLRTGKGEAWNSIQDDGWDFRHPINSNQIEVQTKAELVIQDQEQIQIISHEDTRDGKQEKSIFGKSKFSLCSICKSRRPNIGWKKDFTYKELQVATDGFSMMNSLSQEEYGSIFKGQIEGELNIVVKQHQLTDSQVEKKMMSEVQLILKARHKNVAMLLGSSTEGNQLLTVYEYACNGSLDKYLSKESCRPLSWRERVNVAVGVSRGLKYLHENNIIHGSIKPSNILLNHEFEPMLGDFSFGKTKHEPKKSYKDKNLGNSGYKAPEYLENGKLSTKTDVYSFGVVLLELITGQRATNKISGEKSLVEWAKPLLGGKKYPQLLDPKIGSSYEEDQLHWLVQVTEQCLRKNPKERLTMNMAVSALQGITDNKEHCIIEDFSPTISNSTCSTSDITSSQALFPEVRRRVLMITKWIGQTNPYHLNKEEYIKSSHYGQERNSQLTTKNNDMIGHINADHLHQDEKQMQSRFNGEERSSEQMLSDNHMMGLTNNNQLNKNEEQMNRNPPGEKSSRQKISSSPMIDQTKVDQPNQDQEAQSSFIRDEKPLSQTTGETKADILSHHNKQQNRSSNESLLDGHQGAIILDNSKSFACSICKSRRPNIGWQKEFTYNELEAATNGFSIENCLSEGGNGPAFKGVLESKVKIVVKKHQITIAQEEKIFMSEVQLLTKAIHKNVVMLLGSCPDRSQLMIVYELACNGSLDQYLSRGSRQPLTWRDRVKVAIGVSRGLKYLHEINIVHGSIKPSNILLTHELEPLLGDFGFKKAKLELKKSHKDKNVNNSEYTAPEYLESGKLSSKTDVYSFGVVLLELITGRMATDKLSGGKSLVQWAKPLLGGKKYPQLVDTKISSSYKEEQLLWLIQVTEQCLRKNPKERLTMNMVVSALQDIADTDYFPAIEDSSPEKPYLPHTTTSSQGQTKEDQLCWEQEQIESCPYREERNLRPKIKNNDIIGHRKADQLNQDGEQMQSSPNGEERNLRVTISNNHKIDQIKADKMSKDQEDIEGSLQIEERGLRLAPIGNQIINENEDIKQEIIPDQKQMQSVFHGDSLDKCKANIMLEDSKSALCSICKSKRPSIGWQKDFTYKELLTATDEFSIKNSLSEGAYGPTFKGQLHCNLKIVVKKLQMTSSLEEKIYKSEVQLLTRAKHENVVMLLGSCIEETKLLIVYENACNGALDQGKPQIINMERKGENSNRCLQRSKAKPLLRGCKYPQLVDQNTSSSCDDQELFSLVQVTEKCLRKNPTERLTMNMVISALPCLVATSSQDNEESPAEDDLNRDVSQEIENCIICRGSNQETNVSQERMNHITCCGSNKEAQETERLSPELHIDTLMLSPFIIMIDETRTSIISIQKS 1576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2360 1576 FunFam Lectin-domain containing receptor kinase A4.3 403 603 - -
Glsi10g2360 1576 FunFam Proline-rich receptor-like protein kinase PERK8 1280 1393 - -
Glsi10g2360 1576 SUPERFAMILY Protein kinase-like (PK-like) 312 621 IPR011009 -
Glsi10g2360 1576 ProSiteProfiles Protein kinase domain profile. 845 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2360 1576 MobiDBLite consensus disorder prediction 1121 1145 - -
Glsi10g2360 1576 MobiDBLite consensus disorder prediction 202 232 - -
Glsi10g2360 1576 MobiDBLite consensus disorder prediction 1129 1145 - -
Glsi10g2360 1576 SUPERFAMILY Protein kinase-like (PK-like) 1298 1401 IPR011009 -
Glsi10g2360 1576 FunFam Proline-rich receptor-like protein kinase PERK8 289 402 - -
Glsi10g2360 1576 Gene3D Phosphorylase Kinase; domain 1 812 920 - -
Glsi10g2360 1576 Gene3D Phosphorylase Kinase; domain 1 1280 1392 - -
Glsi10g2360 1576 MobiDBLite consensus disorder prediction 722 779 - -
Glsi10g2360 1576 ProSiteProfiles Protein kinase domain profile. 327 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2360 1576 Pfam Protein tyrosine and serine/threonine kinase 847 1109 IPR001245 GO:0004672|GO:0006468
Glsi10g2360 1576 Pfam Protein tyrosine and serine/threonine kinase 329 589 IPR001245 GO:0004672|GO:0006468
Glsi10g2360 1576 Pfam Protein tyrosine and serine/threonine kinase 1320 1401 IPR001245 GO:0004672|GO:0006468
Glsi10g2360 1576 Gene3D Phosphorylase Kinase; domain 1 300 402 - -
Glsi10g2360 1576 Gene3D Transferase(Phosphotransferase) domain 1 922 1123 - -
Glsi10g2360 1576 Gene3D Transferase(Phosphotransferase) domain 1 404 611 - -
Glsi10g2360 1576 Gene3D Transferase(Phosphotransferase) domain 1 1399 1508 - -
Glsi10g2360 1576 SUPERFAMILY Protein kinase-like (PK-like) 829 1132 IPR011009 -
Glsi10g2360 1576 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 921 1119 - -
Glsi10g2360 1576 FunFam Proline-rich receptor-like protein kinase PERK8 807 920 - -
Glsi10g2360 1576 MobiDBLite consensus disorder prediction 167 235 - -
Glsi10g2360 1576 PANTHER OS01G0253100 PROTEIN 1255 1401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2360 Glsi-ChrGlsi10 20633250 20651756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2360 315 591 Trihelix Transcription Factor Family AT5G38560 37.847 9.60e-56 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Glsi10g2360 PK_Tyr_Ser-Thr 1.2e-42 CL0016