Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2351 ATGCCCCTCTTCTCTTCAAACAAAATCCCTCTACTCTCTTTCTCTCTCTATTTCTATTTCCCCATTCCAACTTTTCCCTTTGGCTTGGTTGGTTGCCCAGAAAACAGAGCCCAGACCTTCCTTCTCCCTTGCGTGCTGATTGAAAGCCTTTGCTGCATCCACTTCAGAGTCCACTCTCTTCCCACTCTTCTGCATCAACCAAAACAAATGGCTGTCACCTTCTCAGATCTCCACACAGAATCCGGCCTCAAATCACTCGATCAATTCCTCTCTGGCAAAGCCTACATTTCTGGGAATCAATTGACGAAGGATGACATTAAGGTGTACGCATTTGTATTGAAGAACCCAGGTGTCTCTTTTCCCAATGTTAGCAAGTGGTACGATGCTGTCTCTTCCCGTCTTGCTGAAAGCTTCCCCGGAAAAGCAGAAGGAGTAAGATACTGTGGCAAAGGTACTTCGGCTGAGGCTGCTCCTGCCAAGGCGGATGCTCTTGCTGATGATGATGATGACCTTGATCTCTTTGGTGATGAGACAGAGGAGGAAAAGAAGGCAGCCGAAGCAAGGGAGGCTGTTAAAAAGGAATCCTCCAAGAAGAAAGAGAGTGGGAAGTCTTCCGTTCTGCTTGATGTGAAGCCTTGGGACGATGAGACAGACATGAAGAAGCTGGAAGAGGCTGTTCGTAGCATTGAGATACCCGGACTTCTGTGGGGAGCATCCAAGCTGGCTCCTGTTGGTTACGGTATCAAGAAACTGCAGATCATGATGACTATCGTTGATGACCTTGTATCTGTGGACACCCTTATTGAGGAACGTCTTACTGTTGAGCCATGCAACGAGTATATCCAAAGCTGTGACATCGTTGCATTCAACAAAATTTAA 879 0.4699 MPLFSSNKIPLLSFSLYFYFPIPTFPFGLVGCPENRAQTFLLPCVLIESLCCIHFRVHSLPTLLHQPKQMAVTFSDLHTESGLKSLDQFLSGKAYISGNQLTKDDIKVYAFVLKNPGVSFPNVSKWYDAVSSRLAESFPGKAEGVRYCGKGTSAEAAPAKADALADDDDDLDLFGDETEEEKKAAEAREAVKKESSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEIPGLLWGASKLAPVGYGIKKLQIMMTIVDDLVSVDTLIEERLTVEPCNEYIQSCDIVAFNKI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2351 292 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 167 175 IPR001326 GO:0003746|GO:0005853|GO:0006414
Glsi10g2351 292 SUPERFAMILY eEF-1beta-like 200 292 IPR036219 -
Glsi10g2351 292 SUPERFAMILY GST C-terminal domain-like 54 133 IPR036282 -
Glsi10g2351 292 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 281 292 IPR001326 GO:0003746|GO:0005853|GO:0006414
Glsi10g2351 292 CDD EF1B 206 292 IPR014038 GO:0003746|GO:0006414
Glsi10g2351 292 FunFam Elongation factor 1-beta 1 like 197 292 - -
Glsi10g2351 292 Gene3D - 53 137 - -
Glsi10g2351 292 Gene3D - 196 292 IPR014717 -
Glsi10g2351 292 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 77 292 - -
Glsi10g2351 292 Pfam EF-1 guanine nucleotide exchange domain 205 292 IPR014038 GO:0003746|GO:0006414
Glsi10g2351 292 SMART EF1_GNE_2 203 292 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2351 Glsi-ChrGlsi10 20278214 20283183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2351 70 292 Eukaryotic Initiation Factors Gene Family AT5G12110 71.930 5.96e-104 301