Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2331 ATGGCTTCCAGAGCTGTTGTTCATCAGGAACTACAAAGAGGTGATAATAAGCAAAAGAATGTAGCGGCAGAAGGAAGGAATAGAAGGGTACTCCAGGATATTGGTAATCTTGTTGTTAAGCAGGCAGAGAAGCCCGGTGCTAATGTTTCTAAACGCATCACGAGGAAACTTGGTGCTCAGTTATTGGCTAATGGGCAAGCAGCAGCAGAAGCAGAGAAGAATAAGAAACCAGGTATTGAATTGGTGAATGGCGCAGCAGCAACAAAGGTTTTAGCAGCTGAGAAGATCGTTTCTGAGAAGCCTCCAGAACCTGATGTTATTATCATCAGCTCTGATGAAGAATCTGAGGCAGAAAAGAAGGAACCTGCTAAAGGAAGAAAGACACAAGAACGTTCTGCCAGGAAGAATGTCAAGACCCTCAGTTCAATCCTCACTGCTCGAAGCAAGGCTGCTTATGGACTTGCTTACAAGCCAAAGGATCCAGTAGTAGACATTGATGAAACTGACAAAGACAATGAATTGGCAGCAGTTGAGTATCTTGATGACATCTACAAGTTTTACAAACTCACAGAGGATGATAGTCGTGTACATGATTACATGGGATTGCAACCTGACATAAATGCCAAGATGAGGTCAATCCTTGTGGACTGGTTATTCGAAGTACATCGAAAATTCGAACTCATGCCCGAAACTCTTCATCTGACAATAAACATTGTCGACCGGTTCCTGTCCTTGAAGGTTGTATCAAGAAGGGAACTTCAGCTGGTTGGCATCAGCTCAATGCTGATAGCCTGCAAGTATGAGGAGATCTGGGCCCCAGAGGTTAATGACTTTGTCTGCATATCAGACAATGCCTATGCGAGAGAACAGGTTCTGGTGATGGAGAAAACGATCTTGAGCAAACTAGAATGGTATTTAACAGTTCCCACACCATATGTCTTCCTTGTTCGGTATATCAAAGCCTCTTCTCCCTCTGATAAGGAGATGGAGAACATGGTGTTTTTCCTCGCTGAACTTAGCCTGGTTCACTATTCTACTGTAATATTGCATAGCCCTTCTGTGATTGCTGCTTCTGCTGTATACGCGGCTCGTTCTACACTGAATCGGAGCCCCTTCTGGACAGAGACTCTGAAGCACTACACAGGCTATTCTGAGGACCAACTAAGGGAATGTGCGAAACTGATGGTGAGCTTTCACTCTGTGGCTTCTGAGAGTAAGCTGAGGGCAGTTCACAAGAAGTTCTGTAACCCAGATCGCAGTTCTGTTGCCCTTCTTGCTCCAGCAAAAAACTTGTCAGCCTAG 1302 0.447 MASRAVVHQELQRGDNKQKNVAAEGRNRRVLQDIGNLVVKQAEKPGANVSKRITRKLGAQLLANGQAAAEAEKNKKPGIELVNGAAATKVLAAEKIVSEKPPEPDVIIISSDEESEAEKKEPAKGRKTQERSARKNVKTLSSILTARSKAAYGLAYKPKDPVVDIDETDKDNELAAVEYLDDIYKFYKLTEDDSRVHDYMGLQPDINAKMRSILVDWLFEVHRKFELMPETLHLTINIVDRFLSLKVVSRRELQLVGISSMLIACKYEEIWAPEVNDFVCISDNAYAREQVLVMEKTILSKLEWYLTVPTPYVFLVRYIKASSPSDKEMENMVFFLAELSLVHYSTVILHSPSVIAASAVYAARSTLNRSPFWTETLKHYTGYSEDQLRECAKLMVSFHSVASESKLRAVHKKFCNPDRSSVALLAPAKNLSA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2331 433 PIRSF Cyclin_A_B_D_E 1 433 IPR046965 GO:0016538|GO:0044772
Glsi10g2331 433 Gene3D - 196 307 - -
Glsi10g2331 433 CDD CYCLIN_AtCycB-like_rpt2 309 427 - -
Glsi10g2331 433 SUPERFAMILY Cyclin-like 171 306 IPR036915 -
Glsi10g2331 433 CDD CYCLIN_AtCycB-like_rpt1 159 304 - -
Glsi10g2331 433 MobiDBLite consensus disorder prediction 1 27 - -
Glsi10g2331 433 Pfam Cyclin, N-terminal domain 182 306 IPR006671 -
Glsi10g2331 433 MobiDBLite consensus disorder prediction 112 132 - -
Glsi10g2331 433 MobiDBLite consensus disorder prediction 10 26 - -
Glsi10g2331 433 PANTHER CYCLINS 130 404 IPR039361 -
Glsi10g2331 433 MobiDBLite consensus disorder prediction 111 132 - -
Glsi10g2331 433 Pfam Cyclin, C-terminal domain 309 426 IPR004367 -
Glsi10g2331 433 FunFam G2/mitotic-specific cyclin-1 297 423 - -
Glsi10g2331 433 SMART cyclin_7 313 397 IPR013763 -
Glsi10g2331 433 SMART cyclin_7 216 300 IPR013763 -
Glsi10g2331 433 SMART Cyclin_C_2 309 428 IPR004367 -
Glsi10g2331 433 Gene3D - 182 423 - -
Glsi10g2331 433 SUPERFAMILY Cyclin-like 310 430 IPR036915 -
Glsi10g2331 433 ProSitePatterns Cyclins signature. 211 242 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2331 Glsi-ChrGlsi10 19975120 19977842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2331 8 432 Core Cell Cycle Gene Families AT2G26760 53.521 9.07e-153 436