Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2323 ATGGAACAGAGAAGAAGCTTTTCACCCTTCCTATTCTCAACTCTCTCTTTTCTTCTTCTTCTCCTCTGTTTCTCAGGATCTGCCAAAGCTTACAAGAACTACACAGTGGGAGATTCTCTGGGTTGGTTTGACAATTCTGAGAAGCCTGTTGATTACCAGAAATGGGTTTCTGGAAAAGAGTTCAGCCTTGGAGATTTCCTCATTTTCAACACAAACACTAACCACTCAGTTGTCCAAACAAGCAATTTCACGACATACAAACTATGTGATTATAATAACGCTCAAGATGCAGACACATTCCAATGGTCATCATCTGATCCTTCTAATACTGATACCCAGTCGATGTCAGTAGCAGTGCCATTGCTTAAGGAAGGGATGGCATACTTCTTCTCGAGTGATTATGATGGCGATCAATGTAAGAATGGGCAGCATTTTCAAATAAATGTGACCTACGGACAAGGGTTGCCAAAAAGTTTGAAAAGCCCTAGTGAGGACTCTCCCTCTCCAGCAAGTCCGGTTGCCGGCGATGATGATTCCGTGCCCGATACTATTGTTCCTTCAAATTTCAGTAACCCTAAGAAACAAAGTGATGATGATGAGAAGGACAATGATAAAGAGAAAGGAAAATCTGCATCTGCTTCAATGTCAACTTATGCAAAACTCCACAAGAATTTATATGGGTGCCAAGGCAAACAATATGAATTGGGAGACCCTGGAGACAAATTTCATGGTGTGTTGGGTGTTGTGTTTTTTCCCCTTATGCTGCACCCCAAGAAGCAGAGATCACCTTTAGAGCTCCAGAAAGGGAAAAAGGGTAGGAAACAAGATGAAAGTAAAAAGGGTGCTGGTAAAAAGCGCCATTGCGTGCACCCCTGGATTACAAATAGCAGTCATTTGTTAATGTGGCTTTGCGAGGATGATCCTTGA 927 0.4229 MEQRRSFSPFLFSTLSFLLLLLCFSGSAKAYKNYTVGDSLGWFDNSEKPVDYQKWVSGKEFSLGDFLIFNTNTNHSVVQTSNFTTYKLCDYNNAQDADTFQWSSSDPSNTDTQSMSVAVPLLKEGMAYFFSSDYDGDQCKNGQHFQINVTYGQGLPKSLKSPSEDSPSPASPVAGDDDSVPDTIVPSNFSNPKKQSDDDEKDNDKEKGKSASASMSTYAKLHKNLYGCQGKQYELGDPGDKFHGVLGVVFFPLMLHPKKQRSPLELQKGKKGRKQDESKKGAGKKRHCVHPWITNSSHLLMWLCEDDP 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2323 308 Pfam Plastocyanin-like domain 42 143 IPR003245 GO:0009055
Glsi10g2323 308 CDD Phytocyanin 32 149 - -
Glsi10g2323 308 MobiDBLite consensus disorder prediction 261 283 - -
Glsi10g2323 308 MobiDBLite consensus disorder prediction 153 215 - -
Glsi10g2323 308 ProSiteProfiles Phytocyanin domain profile. 32 151 IPR003245 GO:0009055
Glsi10g2323 308 MobiDBLite consensus disorder prediction 193 209 - -
Glsi10g2323 308 MobiDBLite consensus disorder prediction 261 286 - -
Glsi10g2323 308 PANTHER BLUE COPPER PROTEIN 32 199 IPR039391 GO:0009055
Glsi10g2323 308 MobiDBLite consensus disorder prediction 153 168 - -
Glsi10g2323 308 SUPERFAMILY Cupredoxins 32 149 IPR008972 -
Glsi10g2323 308 Gene3D - 30 151 IPR008972 -
Glsi10g2323 308 FunFam Early nodulin-like protein 18 31 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2323 Glsi-ChrGlsi10 19885079 19893743 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2323 8 206 Phytocyanin Superfamily AT1G08500 56.158 6.06e-70 215