Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2320 ATGCTTCTTTCAAGTGGCTTGGATGGGAAAAAAGCTTTGGTACCTCACATGATTTCCTTTGTTGGTGTTGTTCATGCAGTTTCCAGCACAAACACTAACCACTCAGTTGTCCAAACAAGCAATTTCAAGACATACAAACTATGTGATTATAATAATGCTCAAGACGCAGACACATTCCAATTATCATCATCTGATTCTTCTAATACTGATATCCAGTCGGTGTCGGTGGTAGTGCCATTACTCAAGAAAGGGATGACATACTTCTTCTCGAGTGATTATGATGGTGATCAATGTAAGAATGGGCAGTATTTTCAAATAAATGTGACCTACGGACAAGGGTTGCCAAAAAGTTTAAAAAACCCTAGTGAGAACTCTACCTCTCTTGCAATTGCCGGAGATGATGATTCCTTACCCGATACTATTGTTCCTTCATATTTCAGTAACCCTAAGGAAGAAAGTGATGATGACGAGAAGAACAATGACAAAGAGAAGAGAAAATCTACATCTGCTTCAATGTCAACTTATGCAAAACTCCACATTAATATATATGGGTGCCAAGGCAAACAATATGAATTGGGAGACCCTGGAGACAAATTTCATGGTGTGTTGGGTGTTGTGTTTTTTCCCCTTATGCTGCACCCCAAGAAGCAGAGATCACCTTTAGAGCTCCACAAAGGGAAAAAGGGAAGGAAACAAGATGAAAGTAAAAAGGGTGCTGGTAAAAAGCGCCATTGCGTGCACCCCTCGTGGGAAAAGGTTTAG 762 0.4042 MLLSSGLDGKKALVPHMISFVGVVHAVSSTNTNHSVVQTSNFKTYKLCDYNNAQDADTFQLSSSDSSNTDIQSVSVVVPLLKKGMTYFFSSDYDGDQCKNGQYFQINVTYGQGLPKSLKNPSENSTSLAIAGDDDSLPDTIVPSYFSNPKEESDDDEKNNDKEKRKSTSASMSTYAKLHINIYGCQGKQYELGDPGDKFHGVLGVVFFPLMLHPKKQRSPLELHKGKKGRKQDESKKGAGKKRHCVHPSWEKV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2320 253 SUPERFAMILY Cupredoxins 31 108 IPR008972 -
Glsi10g2320 253 Gene3D - 19 110 IPR008972 -
Glsi10g2320 253 ProSiteProfiles Phytocyanin domain profile. 1 110 IPR003245 GO:0009055
Glsi10g2320 253 MobiDBLite consensus disorder prediction 117 131 - -
Glsi10g2320 253 MobiDBLite consensus disorder prediction 149 168 - -
Glsi10g2320 253 Pfam Plastocyanin-like domain 31 102 IPR003245 GO:0009055
Glsi10g2320 253 MobiDBLite consensus disorder prediction 226 253 - -
Glsi10g2320 253 FunFam Early nodulin-like protein 18 25 111 - -
Glsi10g2320 253 MobiDBLite consensus disorder prediction 117 170 - -
Glsi10g2320 253 MobiDBLite consensus disorder prediction 217 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2320 Glsi-ChrGlsi10 19808433 19811968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2320 27 158 Phytocyanin Superfamily AT1G08500 52.857 1.01e-38 133