Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2306 ATGGCTGTTAGGTGGTGGTGGTGTGTTTTAGCTGCTATTCTATCACTCTCGCCATCTTTTACCACTTCTTCATCTATTGTCAACAGGCTACCAGGTTTTGATGGTGATCTCCCCTTCAAGCTTGAAACTGGATACATTGAAGTGGGGGATGTGGAACTGTTTTATTATTTTGTGGAGTCACAGAGAAACCCCTCAACGGATCCACTCTTGTTATGGCTTGTTGGAGGCCCTGGTTGCAGTGGACTTAATGCGTTCTTCATGGAAACTGGACCTGTAAGCTTTAACTTCAGCCACAGTTTGACAAATCCAAAGCTGACGGTGAATCCATATGCTTGGACACAGGAACTCAATATGATATACGTTGATTTACCAGCGGGCACTGGATTTTCTTACTCAAAAACACAAGAGGGCTACCATCCTAGTGATACAAAATGGGTAGAGCAAGCATATGGTTTTCTAAAGAAGTGGTTTGTTGATCACCCTAAGTTTGAGACAAATCCATTTTACATAGGCGGTGGTTCGTATTCGGCTATACCTATTGCTCCCCTTGTTCAGAAAGTATATGACGGTTATAAAGTAGGAGACAAGCCAGTCATGAACATCAAAGGTTATGTGCTCGCGAGCCCGTTAGCCCAAAAAAAAAGGGAGGTCAACGACAGAGTTGCATATGCATACATGACCGGTATAGTGTCAGAGGAACTCTATGAGTCAATGAGAGCAAATTGTAATGGTGATTACGTCGACATTGATCCAAGAAACACAAATTGTGTCTCAGACAACAAAGCTTACCATGAACTGCTGCGTTATGTTTATTCGAAATTTATATATGCGCCTGTTTGTATGACTACATCCAAAGAGACTCGAAGAGTTCTCCTAAAAGGCTCTCAGACAATTCTCCAACCGTTGCAAGAGAAGTTAACACGTTATTGTATAGATGACAGTCATATGTTTGACGCATGGGCAAATGATAGGGCTGCCAGAAATGCTCTGCATATTAAAGAGGGAACCAAAGAGAAGTTTGAAGCATGCAACGAAAGTCTAGCATACACGTACGATCTATCGAATGTTGTTAATTATCATCAGAGTCTCACCAACACAAACCTTCGAGCTCTTATCTATAATGGTGATATGGACCTGACGTTACCACTTTTCAGTACAAGAAATTGGATAGCGGATCTTAATTTGAGTATATATGATAGATGGCGTCCATGGTCCGCTCTAGAGGAAGCGACAGGATACACTCAAACCTACAGTAAGAATGGGAAGTTCTACTTGACATTTGCCACTGTTAAGGAAGCTGGCCATGTTGCCCAATACGCCAAGCCTAGAGAAGTATACCTTATGATTAAGAGGTGGTTTGATTTCTCTCCCCTCTGA 1377 0.4212 MAVRWWWCVLAAILSLSPSFTTSSSIVNRLPGFDGDLPFKLETGYIEVGDVELFYYFVESQRNPSTDPLLLWLVGGPGCSGLNAFFMETGPVSFNFSHSLTNPKLTVNPYAWTQELNMIYVDLPAGTGFSYSKTQEGYHPSDTKWVEQAYGFLKKWFVDHPKFETNPFYIGGGSYSAIPIAPLVQKVYDGYKVGDKPVMNIKGYVLASPLAQKKREVNDRVAYAYMTGIVSEELYESMRANCNGDYVDIDPRNTNCVSDNKAYHELLRYVYSKFIYAPVCMTTSKETRRVLLKGSQTILQPLQEKLTRYCIDDSHMFDAWANDRAARNALHIKEGTKEKFEACNESLAYTYDLSNVVNYHQSLTNTNLRALIYNGDMDLTLPLFSTRNWIADLNLSIYDRWRPWSALEEATGYTQTYSKNGKFYLTFATVKEAGHVAQYAKPREVYLMIKRWFDFSPL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2306 458 FunFam Carboxypeptidase 308 458 - -
Glsi10g2306 458 Pfam Serine carboxypeptidase 31 453 IPR001563 GO:0004185|GO:0006508
Glsi10g2306 458 FunFam Serine carboxypeptidase-like 19 20 286 - -
Glsi10g2306 458 Gene3D - 307 457 - -
Glsi10g2306 458 SUPERFAMILY alpha/beta-Hydrolases 27 454 IPR029058 -
Glsi10g2306 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Glsi10g2306 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Glsi10g2306 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Glsi10g2306 458 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Glsi10g2306 458 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 439 IPR001563 GO:0004185|GO:0006508
Glsi10g2306 458 Gene3D alpha/beta hydrolase 21 292 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2306 Glsi-ChrGlsi10 19589183 19598269 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2306 320 458 Calmodulin-binding Proteins AT2G22960 40.288 2.24e-31 117