Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2301 ATGGCCATGGTGGCTACGTGGTGGTGGTGTGTTTTAGCTGCTATTCTATCACTCTCGCCATCTTTTACCACTTCTTCATATATTATCGACAAGTTACCAGGTTTCGATGGTGATCTCCCCTTCAAGTTTGAAACTGGATACATTGAAGTAGGGGAGGCGGAACTATTTTACTATTTTGTGGAGTCTCAGAGAAGCCCCTCTACAGATCCGCTCTTGTTATGGCTTGTTGGAGGCCCTGGTTGCAGTGCACTTAATGCTCTCTTGGTCGAAAATGGACCTTTGAAATATAACATGTTCGGCAGTTCGACAGAGTCAAAACTGAAGGTGAATCCAAATGCTTGGACACAGGAACTCAATGTGATATACGTTGATTTACCAGTGGGCGCTGGATTTTCTTACTCAAAAACACAAGAAGGCTATCATTCCAGTGATACGAGATGGGTAGAGCATGGATACGGTTTTCTAAAGAAGTGGTTTGTTGATCACCCTATGTTTGAGACAAATCCATTTTACATAGGCGGTGGTTCATATTCGAGTATACCTGTTCCTCCCCTTGTTCAGAAAGTATACGAAGGTAATAAACTGGGAGACAAGCCAGTCATGAACCTCAAAGGGTATCTGCTCGCAAGCCCGTTTGCCGATACATTTGAGGATGTTAACAGCAGAGCTCTATATGCAAACATGATGGGTGCTATATCAATTGAACTCTATGAGTCAATGAAAGCAAATTGTAATGGTGATTACGTCCTCCTGAATCGAAGCAACGCAAATTGTGTCTCAGACTACAATGATTACGCTGAGCTGATTCGTTATTTTTATTCGAGGAACATATTGGTACCTGCTTTGGCGACTACACCCAATGAGACTCGAAGAGTTCTCTCAAAAGGCTCGCAGAGAATTCTCCAATTAGTACAAGAGACGATAACAGCTTTGTCAATGGGTGAACCTTATTCATATGAAGAGTGGGTAAATGAAAGGGCTGTTAGAAATGCTCTTCATATTAAAGAGGGAACCAAAGGGAAATTTGAAGCATGCAACGGCAGTCTAGCATACACATTCGATCAAACGAATGTTCTTAATTATCATCACAATCTCACCAACACTAACCTTCGAGCTCTTATTTATAGTGGTGATCTGGACATCATGACGCCACTTTTCTGCACACGAAAATGGATAGCAAAACTTAATTTGAGTATACATGATAGATGGCGTCCATGGTTCACTCGACAGCAACCACAAGGGTTCACTCAAACATACAGTAAGAATGGGAAGTTCTACTTGACATATGCCACTGTCAAGGGAGCTGGTCATGTTGCCCAATATTCCAAGCCTACAGAAGTATACTATATAATCAAGAGGTGGTTTGATTTCTCTCCCATCTAA 1383 0.4187 MAMVATWWWCVLAAILSLSPSFTTSSYIIDKLPGFDGDLPFKFETGYIEVGEAELFYYFVESQRSPSTDPLLLWLVGGPGCSALNALLVENGPLKYNMFGSSTESKLKVNPNAWTQELNVIYVDLPVGAGFSYSKTQEGYHSSDTRWVEHGYGFLKKWFVDHPMFETNPFYIGGGSYSSIPVPPLVQKVYEGNKLGDKPVMNLKGYLLASPFADTFEDVNSRALYANMMGAISIELYESMKANCNGDYVLLNRSNANCVSDYNDYAELIRYFYSRNILVPALATTPNETRRVLSKGSQRILQLVQETITALSMGEPYSYEEWVNERAVRNALHIKEGTKGKFEACNGSLAYTFDQTNVLNYHHNLTNTNLRALIYSGDLDIMTPLFCTRKWIAKLNLSIHDRWRPWFTRQQPQGFTQTYSKNGKFYLTYATVKGAGHVAQYSKPTEVYYIIKRWFDFSPI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2301 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Glsi10g2301 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 122 IPR001563 GO:0004185|GO:0006508
Glsi10g2301 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Glsi10g2301 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Glsi10g2301 460 FunFam Serine carboxypeptidase-like 19 22 287 - -
Glsi10g2301 460 Pfam Serine carboxypeptidase 33 455 IPR001563 GO:0004185|GO:0006508
Glsi10g2301 460 FunFam Carboxypeptidase 312 460 - -
Glsi10g2301 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 441 IPR001563 GO:0004185|GO:0006508
Glsi10g2301 460 SUPERFAMILY alpha/beta-Hydrolases 29 456 IPR029058 -
Glsi10g2301 460 Gene3D - 314 459 - -
Glsi10g2301 460 Gene3D alpha/beta hydrolase 23 293 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2301 Glsi-ChrGlsi10 19307264 19318033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2301 322 460 Calmodulin-binding Proteins AT2G22960 41.727 3.74e-32 119