Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2269 ATGGAAGTTTATTGTGAAGCTCACCCACTAGATATTACTACTGATTCTGTCTCAGAAAGCCCGCTATCTCCTAGTGAGAATCAGTACTTTAATATTAAAGTCTATTATGATGAAAAATTCTACATGCTCGATGAAACCAGTTCTCTGTTGCCTATTTGTGATACCACTGAGTATATTATCTCAGATATCCCAAAGGAGGCAATAGAACAAGAAACTTACACATTGCTTTCCTATTTGAGTGTGGCTGAGGAAGATCGTGACTTCATAGCGGAGAAGATATTGACTTATGCGAATAATATGGTTAATGTTACTCACAAGAACCACAAGTTTCTGTATATGAATGTGTTTATGTCAGTCACCCGGTTCAATGAAGATGATGATGAGTTTGTGGAGGAACCTATGGAGCATCAAGTGCATGGCTTCGTGCCTGCATCTAAGTCAGCCATTGATGGATTGGAGAGGGTGAAAGTCATGGAAAAGTGTAACTGTGCAATTTGCTTAGAAGATTTCGAAGTTGATTCAAAAGGTGTTCGTATGCCCTGCTTGCACTTATTTCATGAAATTTGTATGATTAATTGGTTGCAAGAAGGCCATTCTTGCCCTTTGTGTCGCTTTGAGATGCCTATCAGTGAGAGTGAATGA 642 0.391 MEVYCEAHPLDITTDSVSESPLSPSENQYFNIKVYYDEKFYMLDETSSLLPICDTTEYIISDIPKEAIEQETYTLLSYLSVAEEDRDFIAEKILTYANNMVNVTHKNHKFLYMNVFMSVTRFNEDDDEFVEEPMEHQVHGFVPASKSAIDGLERVKVMEKCNCAICLEDFEVDSKGVRMPCLHLFHEICMINWLQEGHSCPLCRFEMPISESE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2269 213 SMART ring_2 163 203 IPR001841 -
Glsi10g2269 213 SUPERFAMILY RING/U-box 153 209 - -
Glsi10g2269 213 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
Glsi10g2269 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 210 IPR013083 -
Glsi10g2269 213 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 120 208 - -
Glsi10g2269 213 Pfam Ring finger domain 162 204 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2269 Glsi-ChrGlsi10 18609021 18609662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2269 121 213 C3H Transcription Factor Family AT1G68180 42.308 1.09e-16 74.3