Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi10g2257 | ATGCTTGGCGGCATGAGATTTGGGAATAGTGATTGGGAAGTGCTTTTTGTTTGGGTAATGTCGCGGACTGATAGAATGACTTCGGATCTTAACAAAACTGGACCTGTGGAAAGAGACACTGAGCAGGCCATTACTGCTTTAAAGAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGAAAGCCCAAGTTTTGTCCTTTCCGCCTTTCAAATGATGAATCTGTTTTGATATGGTTCTCAGGGAAGGAGGAGAAACACCTTAAACTTAGCCATGTCTCTAGAATTATATCTGGACAACGCACGCCAATCTTTCAAAGATATCCGCGGCCTGAGAAGGAATACCAGTCATTTTCTCTGATCTACAATGATAGGTCACTTGACTTGATTTGCAAAGATAAAGATGAAGCTGAAGTATGGTTCAGTGGTTTGAAAGCATTAATATCACGTAGCCGTCATCCGAAGTGGAGAACAGAGTCAAGAAGTGACGGTATTCCATCTGAAGCTAATAGTCCACGAACATACACTAGAAGAAGTTCTCCCTTAAATTCTCCATTTGGTAGTAATGAAAGCCTGCAAAAGGATAGTGGGGATCACCTTCGCCTTCATAGCCCATATGAGAGCCCCCCTAAGAATGGTTTGGATAAAACACTATCTGATGCAATTTTGTATGCTGTTCCCCCAAAGGGGTTCTTCCCTCCAGATTGCGCCAGTGGTTCAGTGCACTCTGTGTCATCAGGAGGATCAGATAGTGTACATGGTCACATGAAGGCAATGACTATTGATGCTTTTAGAGTTAGTCTATCAAGTGCTGTCAGCTCATCCAGCCAAGGTTCTGGTCATGACGATGGTGATGCATTAGGGGATGTTTTCCTTTGGGGGGAAGGCACAGGGGATGGTGTTCTGGGTGGTGGGATTCAGCGAGTTGGTGGTTGTTCTGGTGTAAAAATGGATTCTCCATTGCCTAAAGCCTTAGAATCTGCAGTAGTACTTGATGTACAGAACATTGCTTGTGGTGGACGGCATGCAGCCTTAGTGACTAAGCAAGGAGAGATTTTTTCCTGGGGCGAGGAATCAGGAGGTAGGCTTGGGCATGGCGTTGACACTGATGTTCTCCATCCAAAGCTCGTAGAAGCTCTAAGTAATACAAATATTGAACTTGTAGCTTGTGGGGAGTATCATACATGTGCTGTGACATATTCTGGTGATCTTTATACATGGGGTGATGGCACTTACAATTATGGTCTTCTTGGGCATGGAAATCAAGTGAGCCACTGGGTCCCAAAAAGGGTAAATGGACCCTTGGAGGGCATGCATGTTTCATCTATCTCTTGTGGACCATGGCATACTGCTGTTGTAACCTCTTCTGGACAATTATTTACTTTTGGTGATGGTACATTCGGTGTTCTAGGCCATGGAGACCGAAAAAGTGTTTCAGTACCAAGGGAAGTAGAGTCCCTTAAGGGACTTCGTACTGTGCGTGCTGCTTGTGGTGTTTGGCATACTGCTGCAGTAGTGGAAGTTATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCGGGTAAGCTGTTTACTTGGGGTGATGGAGATAAAGGTCGACTTGGGCATGGTGACAAGGAAGCAAAACTTGTTCCTACCTGTGTTGCAGCTCTTGTTGAGCCCAACTTTTGTCAAGTTGCATGTGGACATAGTCTGACTGTTGCTCTTACTACCTCAGGTCAAGTATATACGATGGGTAGTCCTGTCTATGGCCAGTTGGGAAATCCTCAGGTTGATGGGAAGCTACCTACACGTGTTGAAGGAAAGCTCTCGAAGAGTTTTGTGGAAGAGATAGCTTGTGGTGCGTATCATGTTGCAGTTTTAACTTCAAGGACTGAGGTTTACACATGGGGGAAGGGTGCAAATGGACGTTTAGGCCATGGGGATACAGATGATAGAAATAACCCAACATTAGTAGAAGCTCTGAAAGACAAACAAGTCAAAAGTATTGCTTGTGGTACTAATTTCACTGCAGCTATCTGTCTTCATAAGTGGGTCTCTGGTGTTGACCAGTCCATGTGTTCTGGTTGCCGTCTGCCATTTAATTTCAAAAGAAAACGTCATAACTGTTATAATTGTGGACTTGTTTTTTGTCATTCATGCAGCAGTAAGAAGTCTCTTAAGGCTTCAATGGCACCAAACCCAAACAAACCTTATCGTGTCTGTGATAATTGTTTTAATAAACTAAGAAAAACTATTGAAAGTGACTCTTCATCACATTCTTATGTGAGCAGAAGAGGAAGTATCAATCAGGGGTCACTTGAGTTTATTGATAAGGATGATAAGTTGGATTCAAGATCTCGTAATCAACTTGCTAGGTTTTCTTCAATGGAATCCTTGAAGCAAGTGGAAAGCAGGTCTTCGAAGAAAAACAAGAAATTGGAATTCAACAGTAGTCGAGTCTCACCTGCTCCAAATGGAGGTTCCCAGTGGGGAGCTCTGAATATTTCTAAATCTTTTAATCCTGTTTTTGGATCGTCGAAGAAGTTTTTTTCAGCTTCTGTTCCTGGATCTAGAATTGTTTCTCGAGCAACATCCCCAATATCGAGGCGGCCCAGTCCACCTCGTTCAACTACTCCAACCCCAACACTGGGAGGACTTACTTCCCCAAAGTTAGTTGTTGATGATGCTAAGAGGACAAATGATAGCCTCAGTCAAGAGGTTATTAAATTAAGAGCGCAGGTGGAAAATTTGACTCGCAAATCTCAACTTCAAGAAATTGAGTTGGAAAGAACAACTAAACAACTGAAGGAAGCAATAGAAATTGCTGGTGAAGAAACTGCTAAATGTAAAGCAGCAAAGGAAGTGATCAAGTCCCTTACTGCCCAGTTGAAGGAAATGGCTGAGAGGCTACCTGTAGGAGCAGCAAGGAATGTCAAATCACCTTCTCTTGCTTCCTTTGGTTCCAGTCCTGGTTCCAATGAAGTCAGCAATGCTTCTATAGATCGATTGAATATTCAAGCTACTAGCCTTGAACCGGAATTGGTGGGATCAAACAACCAGTTACTTTCAAATGGATCAAGCACCATTAGTAACCGTATTGCAGGTCACAATAAACAGAGCCAGTCAGATGCAACGAATAGAAATGGAAGCAGAACAAAGGAAAGTGAATCTCGTAATGAGTCTGAATGGGTTGAGCAGGATGAACCTGGTGTATACATTACACTCACCTCCCTACCAGGAGGCATAAAAGATCTGAAAAGGGTTCGCTTCAGTCGGAAGCGGTTTAGTGAGAAACAGGCAGAACAATGGTGGGCAGAGAATCGGGCACGAGTATACGAACAGTACAATGTGCGCATGATTGACAAGTCGACTGTTGGTGTTGGTAGCGAGGACCTGGCTCATTGA | 3384 | 0.4365 | MLGGMRFGNSDWEVLFVWVMSRTDRMTSDLNKTGPVERDTEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSRHPKWRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKTLSDAILYAVPPKGFFPPDCASGSVHSVSSGGSDSVHGHMKAMTIDAFRVSLSSAVSSSSQGSGHDDGDALGDVFLWGEGTGDGVLGGGIQRVGGCSGVKMDSPLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDTDVLHPKLVEALSNTNIELVACGEYHTCAVTYSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGMHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQVDGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNNPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTIESDSSSHSYVSRRGSINQGSLEFIDKDDKLDSRSRNQLARFSSMESLKQVESRSSKKNKKLEFNSSRVSPAPNGGSQWGALNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKLVVDDAKRTNDSLSQEVIKLRAQVENLTRKSQLQEIELERTTKQLKEAIEIAGEETAKCKAAKEVIKSLTAQLKEMAERLPVGAARNVKSPSLASFGSSPGSNEVSNASIDRLNIQATSLEPELVGSNNQLLSNGSSTISNRIAGHNKQSQSDATNRNGSRTKESESRNESEWVEQDEPGVYITLTSLPGGIKDLKRVRFSRKRFSEKQAEQWWAENRARVYEQYNVRMIDKSTVGVGSEDLAH | 1127 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi10g2257 | 1127 | ProSiteProfiles | Zinc finger FYVE/FYVE-related type profile. | 680 | 742 | IPR017455 | - | |
| Glsi10g2257 | 1127 | Coils | Coil | 942 | 962 | - | - | |
| Glsi10g2257 | 1127 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 349 | 400 | IPR000408 | - | |
| Glsi10g2257 | 1127 | FunFam | Putative E3 ubiquitin-protein ligase HERC1 | 682 | 750 | - | - | |
| Glsi10g2257 | 1127 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 624 | 675 | IPR000408 | - | |
| Glsi10g2257 | 1127 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 520 | 571 | IPR000408 | - | |
| Glsi10g2257 | 1127 | Coils | Coil | 886 | 927 | - | - | |
| Glsi10g2257 | 1127 | CDD | FYVE_like_SF | 685 | 738 | - | - | |
| Glsi10g2257 | 1127 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 494 | 504 | IPR000408 | - | |
| Glsi10g2257 | 1127 | SMART | fyve_4 | 674 | 743 | IPR000306 | GO:0046872 |
Showing 1 to 10 of 54 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Glsi10g2257 | 10 | 18324888 | 18336127 | Glsi10g2257 | 10 | 18324888 | 18336127 | ECH |
Showing 1 to 1 of 1 entries