Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2256 ATGGGTGATCAAGAAGGCCCATGGCCTAGGGCAGTGACTTCCATTGCACTTAGGAAGGGTGCTGCCCTAAGGGCTTTGTTTGTGTTCGTACTTAATTTTATTATGGCGAAGGATAGCTGCCTGGCTCGCGTCACCGCCGGCGTTGCCGTAGGCGGAGCTGTTGGCGGCGCCATCGGTGCAGTTTATGGGACATATGAGGCTATGAGGTATAAGGTACCCGGATTTTTGAAAATTAGGCATATTGGACAGACTACACTAGGAAGTGCTGCCGTTTTTGGTCTTTTCTTGGGTGCTGGAAGCTTGATACATTGAGCAAGATTCTACGTAGAAGAATCTGCTATAGACAGTGATGGCCATGGAATCCATACTGCCTCAACAGCAGCTGGAAACAAAGTTAATGGTGTGAGCTTTTATGGACTGGCTCAAGGTACCGCAAGAGGAGGGGTTCCATCTGCAAGAATTGCTGCATACAAAGCTTGCAATATTACATGGTGCAATGAAGTTGATGTCTTGGCTGCTTTTGATGATGCCATTGCAGATGGAATTGACATTCTTTCTGTTTCATTGGGAAGTACATCTCCAATTGATTTCAAAAAAGATGCTGCTGCAATTGGTTCTTTTCATGCTATGGCTAGAGGGATACTTACAGTGAATTCTGCAGGAAATAGTGGCCCTGATCCAAGCACAGTAACAAGTTTAGCACCATGGATACTTACAGTAGCATCAAGTAGCATTGATCGTCAATTCATTGACAAGGTTGTTCTTGGGAATGGAAGAACATTGATGGGAAACTCAGTAAATTCTTTCCACTCAAATGAGAGAAAATTTCCTATAACTCTGCAAAATGGTGATTCTGAGAAGTGTCCAAAAGCCCAAGCAGACGAATGCTTTCTCTGCAGATGCAATTGGTGCAATCACAAAGGACGATGGGATGTGTCCTTTGTGAATCCATTACCTTCACTGATCCTCTATCCCCATGACTATGACCTTGTTAAATCTTACACAAGTTCAACAAAAGACCCAGAAGCTGAAATTCTCAAGAGTGAGGTTATAGAAGATCATACTGCTCCAAGAGTGACTGAATCATCTTTGCGCGGGCCAAATGCCATGGCTCCAGAAATTTTGAAACCAGATATAAGTGCCCCAGGAGTACATATCTTGGCTGCATTTTCACCCATTGCTTCACCATCTGAAATTTTTGGAGATAAAAGATCTGTCAAATACAACATACTATCTGGAACCTCTATGTCTTGTCCTCATGTTTCTGGAACAGCTGCATATTTGAAAACCTTTCGCCCAGATTGGTCTCCGGCAGCCATCAAATCTGCTATCATGACTACGGCTAAACCCATGAGTAGGACTAATCATCAGACTGGTGAATTTGCTTTTGGATCTGGGCATCTCAATCCTGCGCAGGCTGTTGATCCAGGACTAGTTTTTGACCTTTCTGAGGAAGATTACAAACAAATGCTCTGCAACATGGGCTATAATGCTCAAACGGTCAAACAAATCTCTGGAGATCAAAGCAGCACATGCCCTGGATCTCCTGACAGATCCCTAGTCAAAAACATGAACTACCCTTCAATAGCAATTCAAGTTCAGAATATGCAGCCTTTCACTATCAAGATTAATAGAACAGTCACAAATGTTGGATCTGCTAACTCAATCTACAAGGCAACTGTCTCACCAAGTTCAAAACTCAACATTACAGTGGCACCTGAGGTTCTGTTCTTCAAATCTTTGAATGAAAAACAGTCTTTTGTTGTCACTGTTGCTGGAGGAAAGTTACCAGAAATAGTGCTTTCCTCATCACTGGTATGGTCAGATGGTACCCACAATGTCAGGAGTCCAATCCTTGTTGATGTCTTAAAACCCAGTTAG 1881 0.4312 MGDQEGPWPRAVTSIALRKGAALRALFVFVLNFIMAKDSCLARVTAGVAVGGAVGGAIGAVYGTYEAMRYKVPGFLKIRHIGQTTLGSAAVFGLFLGAGSLIHXARFYVEESAIDSDGHGIHTASTAAGNKVNGVSFYGLAQGTARGGVPSARIAAYKACNITWCNEVDVLAAFDDAIADGIDILSVSLGSTSPIDFKKDAAAIGSFHAMARGILTVNSAGNSGPDPSTVTSLAPWILTVASSSIDRQFIDKVVLGNGRTLMGNSVNSFHSNERKFPITLQNGDSEKCPKAQADECFLCRCNWCNHKGRWDVSFVNPLPSLILYPHDYDLVKSYTSSTKDPEAEILKSEVIEDHTAPRVTESSLRGPNAMAPEILKPDISAPGVHILAAFSPIASPSEIFGDKRSVKYNILSGTSMSCPHVSGTAAYLKTFRPDWSPAAIKSAIMTTAKPMSRTNHQTGEFAFGSGHLNPAQAVDPGLVFDLSEEDYKQMLCNMGYNAQTVKQISGDQSSTCPGSPDRSLVKNMNYPSIAIQVQNMQPFTIKINRTVTNVGSANSIYKATVSPSSKLNITVAPEVLFFKSLNEKQSFVVTVAGGKLPEIVLSSSLVWSDGTHNVRSPILVDVLKPS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2256 626 Gene3D - 491 623 - -
Glsi10g2256 626 Pfam Fibronectin type-III domain 523 620 IPR041469 -
Glsi10g2256 626 ProSitePatterns Serine proteases, subtilase family, serine active site. 413 423 IPR023828 -
Glsi10g2256 626 Gene3D - 311 352 - -
Glsi10g2256 626 Gene3D - 246 295 - -
Glsi10g2256 626 ProSiteProfiles Serine proteases, subtilase domain profile. 1 474 - -
Glsi10g2256 626 SUPERFAMILY Subtilisin-like 108 478 IPR036852 GO:0004252|GO:0006508
Glsi10g2256 626 PRINTS Subtilisin serine protease family (S8) signature 115 128 IPR015500 -
Glsi10g2256 626 PRINTS Subtilisin serine protease family (S8) signature 412 428 IPR015500 -
Glsi10g2256 626 Pfam Reactive mitochondrial oxygen species modulator 1 39 103 IPR018450 -
Glsi10g2256 626 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 105 619 IPR045051 -
Glsi10g2256 626 Gene3D Peptidase S8/S53 domain 111 245 IPR036852 GO:0004252|GO:0006508
Glsi10g2256 626 Gene3D Peptidase S8/S53 domain 353 487 IPR036852 GO:0004252|GO:0006508
Glsi10g2256 626 SMART Romo1_2 38 104 IPR018450 -
Glsi10g2256 626 Pfam Subtilase family 113 465 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2256 Glsi-ChrGlsi10 18314704 18322457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2256 105 620 Subtilisin-like Serine Gene Family AT5G58830 50.755 5.62e-180 525