Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2244 ATGGCTACTTCTTCTTCTGCTTTCAGTTTTCTATTCTTTTTTTGCTTTCTTCTTCCGTGCCTTACTGGGTCTGTTTCTGTTTCATCACTTCCTTTGTCTTTGAGAAAGCAAGCTTCAATCTTGGTTTCTCTCAAACGTGATTTCGAACCTCTCAATTCTTCTCTGAGCAGCTGGGATATGTCTAACTACTTGTCCCTTTGCGGTACTTGGAGTGGCATTCGATGTGACCACAAGAACAGGTCCGTGGTGTCACTGAACATATCCAATTTCAACGTTTCTGGGTCGCTTTCGCCTGCCATCACAGAGCTCCAAGGCCTTGCCGAGGTTTTGGTGGCCGGAAACGGGTTTTCTGGGGAGTTTCCGGCAGGTATTCACAAGCTGCCAAGGCTAAGGTTTCTCAACATATCCAACAACATGTTCAGTGGGGACTTGAGCTGGGAGTTCTCCCAAATGACCGAGCTTGAAGTGCTGGATGCTTATGACAATAATTTCAACGGCTCACTTCCTTTAGGTATCACTGATCTCCCTAAGATTAAGCACTTGAATTTTGGCGGGAATTACTTTTCTGGGGAAATTCCTCCAAGCTATGGAAACATGGTGCAGCTGAACTATCTCTCTCTTGCTGGAAATGATTTGAGTGGGTTCATACCCAGTGAGCTTGGGAATCTCACCAACCTGACCCACCTTTTCTTGGGATATTACAATCAGTTTGATGGTGAAATCCCGTCTCATTTTGGTAATCTGATCAATTTGGTTCATCTGGACCTTGCAAACTGTAGCTTGAAAGGTCCAATTCCAGCAGAGTTGGGCAAACTAAAAAAACTAGACACTCTCTTCTTGCAAACTAACCAGCTCACTGGTTCAATTCCGCCCCAGTTAGGCAATTTGAGCACCCTGAGATCTCTTGATCTTTCAAACAATGAGCTAACTGGGGACATCCCAGTTGAGTTCTCAGGCCTTCATGAGCTTACCCTCATCAACTTGTTCATCAACAGGTTACATGGTGAGATTCCTCAGTTCATTGCAGAGCTACCAAATTTGCAGACTCTCAAGTTATGGCAGAACAACTTCACTGGAGCCATTCCTTCAAAGCTTGGTCAGAATGGAAAGTTGACTGAGCTTGACCTTTCAACAAACAAGCTCACTGGGTTAGTCCCCAAATCTCTGTGCCTTGGAATGAGGCTGAAGATCTTGATCTTGCTCAACAATTTTCTGTTTGGGTCTTTGCCCGATGATCTTGGTCAATGCTATACACTCCAAAGAGTTCGTCTGGGACAGAACTATTTGACTGGGTCAATTCCAAATGGGTTTCTTTATCTGCCTGAGCTATCACTTCTGGAATTGCAGAATAATTATCTCAGTGGTGTTCTTCCACAAGAAACTGGAAATTCACCTTCAAAACTGGGAGAGTTGAATCTCTCAAACAATCGCTTATCTGGGTCTCTGCCAAGATCAATTGGGAACTTCCCTAGCTTGCAAATTCTTCTTCTCAGTGGAAACAGATTCTCAGGAGAAATCCCACCAGACATAGGGAGGTTGAAGAGTCTCCTCAAGTTGGATATGAGCAGAAACAACATTTCAGGTGGTGTTCCTCCAGAGATAGGCAACTGTGTCTTGCTCACCTACTTAGATTTGAGCCAAAACCAACTATCAGGCCCTATCCCACTTCAAGTTACCCAAATTCATATATTGAACTATCTTAATGTCTCAAGGAACCACCTAAATCAGAGCCTTCCCAAGGAGCTTGGGACCATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAACAACTTCTCCGGTTCAATACCAGAGGTGGGGCTATTTTCAGTCTTGAATTCTACATTCTTTCTGGGTAACCCTCTTCTTTGTGGGTATGATCTGAACCCATGCAGTCATTCATCATCAACCTCAGCATTAGAATCCCAAGACAGAAACAGCACAAAACCTGGGGTCCCTGGGAAGTACAAGCTTCTTTTTGCATTAGCACTTTTGGGATGTTCATTGGTATTTGCAACCTTAGCCATCATCAAGAGCAGAAAAGCAAGGAGGAACTCCAATTCATGGAAGCTCACAGCATTCCAGAAGCTGGAATATGGAAGCGAGGATATCTTAGGGTGCATAAAGGAGAGCAATGTGATAGGAAGAGGAGGAGCAGGGGTTGTCTACAGAGGGACCATGCCAAATGGAGAGGAACTAGCAGTGAAGAAACTCCTAGGAATCAGCAAAGGTTCTTCTCATGACAATGGCCTCTCTGCAGAAATAAGAACACTGGGTAGAATCAGGCACAGGTACATTGTGAGGTTGCTGGCATTTTGTTCAAACAGAGAAACCAATTTGCTTGTCTATGAGTACATGCCAAATGGAAGCTTGGGCGGAGTGCTTCATGGGAAGAGGGGAGAGTTTTTGAAGTGGGAAACTAGGCTGAAGATAGCCACAGAAGCTGCAAAAGGGCTTTGTTATTTGCACCATGATTGTTCCCCTCTGATAATCCATAGAGATGTCAAGTCCAACAACATATTGTTAAACTCTGATTTTGAGGCTCATGTTGCTGACTTTGGGCTTGCCAAGTTCTTGCAAGACACAGGGACTTCAGAGTGCATGTCTTCCATTGCTGGCTCCTATGGCTATATTGCTCCAGAGTATGCATACACACTGAAAGTTGATGAGAAGAGTGATGTGTATAGCTTTGGGGTGGTGCTGTTAGAGCTCATAACAGGGAGGAGGCCAGTGGGTGATTTTGGGGAAGAAGGGCTAGACATTGTTCAGTGGACCAAGATCCAAACCAGCTGGAGCAAAGAGAGGGTGGTGGAGATCCTTGACCAGAGGCTGCATCACATCCCCTTAGATGAAGCAAAGCAGGTGTTTTTTGTGGCTATGTTATGTGTTCAGGAACACAGTGTGGAGAGACCAACCATGAGAGAAGTGGTTGAGATGCTTTCACAAGCAAAGCAGCCCAATACATTTCAAATGCAGTGA 2976 0.4472 MATSSSAFSFLFFFCFLLPCLTGSVSVSSLPLSLRKQASILVSLKRDFEPLNSSLSSWDMSNYLSLCGTWSGIRCDHKNRSVVSLNISNFNVSGSLSPAITELQGLAEVLVAGNGFSGEFPAGIHKLPRLRFLNISNNMFSGDLSWEFSQMTELEVLDAYDNNFNGSLPLGITDLPKIKHLNFGGNYFSGEIPPSYGNMVQLNYLSLAGNDLSGFIPSELGNLTNLTHLFLGYYNQFDGEIPSHFGNLINLVHLDLANCSLKGPIPAELGKLKKLDTLFLQTNQLTGSIPPQLGNLSTLRSLDLSNNELTGDIPVEFSGLHELTLINLFINRLHGEIPQFIAELPNLQTLKLWQNNFTGAIPSKLGQNGKLTELDLSTNKLTGLVPKSLCLGMRLKILILLNNFLFGSLPDDLGQCYTLQRVRLGQNYLTGSIPNGFLYLPELSLLELQNNYLSGVLPQETGNSPSKLGELNLSNNRLSGSLPRSIGNFPSLQILLLSGNRFSGEIPPDIGRLKSLLKLDMSRNNISGGVPPEIGNCVLLTYLDLSQNQLSGPIPLQVTQIHILNYLNVSRNHLNQSLPKELGTMKGLTSADFSHNNFSGSIPEVGLFSVLNSTFFLGNPLLCGYDLNPCSHSSSTSALESQDRNSTKPGVPGKYKLLFALALLGCSLVFATLAIIKSRKARRNSNSWKLTAFQKLEYGSEDILGCIKESNVIGRGGAGVVYRGTMPNGEELAVKKLLGISKGSSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGGVLHGKRGEFLKWETRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKIQTSWSKERVVEILDQRLHHIPLDEAKQVFFVAMLCVQEHSVERPTMREVVEMLSQAKQPNTFQMQ 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2244 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 236 341 - -
Glsi10g2244 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 348 634 - -
Glsi10g2244 991 SMART serkin_6 707 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2244 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 148 235 - -
Glsi10g2244 991 Pfam Leucine Rich Repeat 299 320 IPR001611 GO:0005515
Glsi10g2244 991 Pfam Leucine Rich Repeat 250 272 IPR001611 GO:0005515
Glsi10g2244 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 785 991 - -
Glsi10g2244 991 Pfam Protein kinase domain 709 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2244 991 SUPERFAMILY L domain-like 63 405 - -
Glsi10g2244 991 Pfam Leucine rich repeat 456 502 IPR001611 GO:0005515
Glsi10g2244 991 Gene3D Phosphorylase Kinase; domain 1 677 784 - -
Glsi10g2244 991 SUPERFAMILY Protein kinase-like (PK-like) 701 979 IPR011009 -
Glsi10g2244 991 PRINTS Leucine-rich repeat signature 371 384 - -
Glsi10g2244 991 PRINTS Leucine-rich repeat signature 513 526 - -
Glsi10g2244 991 ProSiteProfiles Protein kinase domain profile. 707 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2244 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 676 784 - -
Glsi10g2244 991 SMART LRR_typ_2 561 585 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 440 464 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 369 391 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 489 512 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 344 368 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 513 537 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 296 319 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 199 223 IPR003591 -
Glsi10g2244 991 SMART LRR_typ_2 272 295 IPR003591 -
Glsi10g2244 991 Gene3D Transferase(Phosphotransferase) domain 1 785 991 - -
Glsi10g2244 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Glsi10g2244 991 Gene3D Ribonuclease Inhibitor 394 505 IPR032675 -
Glsi10g2244 991 Gene3D Ribonuclease Inhibitor 192 289 IPR032675 -
Glsi10g2244 991 ProSiteProfiles Leucine-rich repeat profile. 370 391 IPR001611 GO:0005515
Glsi10g2244 991 Gene3D Ribonuclease Inhibitor 290 393 IPR032675 -
Glsi10g2244 991 Gene3D Ribonuclease Inhibitor 506 631 IPR032675 -
Glsi10g2244 991 Gene3D Ribonuclease Inhibitor 34 191 IPR032675 -
Glsi10g2244 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 201 981 - -
Glsi10g2244 991 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Glsi10g2244 991 SUPERFAMILY L domain-like 317 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2244 Glsi-ChrGlsi10 18223249 18227908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2244 27 981 Receptor kinase-like Gene Family AT5G65700 57.977 0.0 1097
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi10g2244 Pkinase 1.8e-44 CL0016