Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2221 ATGCGTAGTTTTCTCATAGGAAAATTAGGTGCATTAGTGTCGCTGCCATATTGCAGGAGCAGGAGGACCCAAGTGCTACTGGGTTACCCCCACCTGCATCACAATGCTTTCCTCTTTTTCAATTCGTTCGCTTCAAATCAACCAAAACAGCAGCAAGAACAATTCACAGTTTCGTACCTAATCAACTCATGCTGCTTGTCCCCCAATGTAGCTACTGAATTATCCAAAAGGGCACAAAGGAAAAACCCAGATGCTCATGACTCCGTGCTTAATTTTCTCAGGAACTACGGATTCTCCGAAACCCAGATATTTAAGCTTGTGGTGAAATGGCCAACGGTGCTTTCAGCAAAGCCTGAGAAGACCGTTTTGCCCAAATTTGTTTTTTTCCAATCTATAGGCGCGGGATGGTGTTTTGCCTCTTGTAGTCCAAAGCATTTGATTTCAAACGTGAAGGTTTTGAGAGAACATGGAGTGCCTCAATCTTCTGTCTCTCTGTTGGTAACTCTTTATACAACTGTAGCATTTACGAAGCATGCAAAGTTTGTTGAATCTGTCAAGTTTGTGGAGGAAACCGGATTCGATCCCCAGAAAACTGATTTCATCAAGGCAATCAATGTGTTTACAAAGTTGAAGAAATCCGTGTGGGACTCTAGATTTCTTGTCTATGAGAGGTGGGGTTGGTCTAGTGATGTTACTCTTTCAGCATTCAAAAAGCATCCACTGTGTATGTTGATATCAGAAGACAAGATCACAAAATCAATGAGGTTCCTTGTGGATGAAATGTGTTTGTCACCAGAAGATATAGCTAGATACCCATTACTTCTTTGCTATAACTTGGAGAAGAGGGTTATCCCCAGATGCTCTGTAGTTAAAGTTTTGAAAATGAAGCATTTGGTCAAAAATGATTTGTCCATACTTTCAATTGTTACAATAACTGAGAAAAAATTTCTGGAGAAATATGTCATTGGATTTCAGGAAAGTGTTCCTGAACTGTTGGGCATGTATGAAGGCCAAATTCACGTGACAGCGAAGCAACCTCTTCTTGCTTTAGCCCAACGTTTCTCTCTCTCTGTGGCTCCGAGCGTTTTGTCACCCTGTAAGCACGAAACTACCTGCTCTCTCTCTGCACCAACCGATTCCCTTTCCAGCAACTTCCGGCGACCAATCTTCAATTCAGGTAACACTCCCTTAGAAATGGGAAAGACCCCTTTTCCTGTTCTTCCCAGAATCCCTCTGCGAATATAATTTATACGTGAGTAG 1260 0.4206 MRSFLIGKLGALVSLPYCRSRRTQVLLGYPHLHHNAFLFFNSFASNQPKQQQEQFTVSYLINSCCLSPNVATELSKRAQRKNPDAHDSVLNFLRNYGFSETQIFKLVVKWPTVLSAKPEKTVLPKFVFFQSIGAGWCFASCSPKHLISNVKVLREHGVPQSSVSLLVTLYTTVAFTKHAKFVESVKFVEETGFDPQKTDFIKAINVFTKLKKSVWDSRFLVYERWGWSSDVTLSAFKKHPLCMLISEDKITKSMRFLVDEMCLSPEDIARYPLLLCYNLEKRVIPRCSVVKVLKMKHLVKNDLSILSIVTITEKKFLEKYVIGFQESVPELLGMYEGQIHVTAKQPLLALAQRFSLSVAPSVLSPCKHETTCSLSAPTDSLSSNFRRPIFNSGNTPLEMGKTPFPVLPRIPLRIXFIRE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2221 419 Pfam mTERF 140 317 IPR003690 GO:0003690|GO:0006355
Glsi10g2221 419 Gene3D Transcription termination factor 3, mitochondrial 137 326 IPR038538 -
Glsi10g2221 419 Gene3D Transcription termination factor 3, mitochondrial 64 136 IPR038538 -
Glsi10g2221 419 PANTHER CGI-12 PROTEIN-RELATED 52 134 IPR003690 GO:0003690|GO:0006355
Glsi10g2221 419 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Glsi10g2221 419 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Glsi10g2221 419 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Glsi10g2221 419 FunFam Mitochondrial transcription termination factor-like 130 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2221 Glsi-ChrGlsi10 17945155 17955558 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi10g2221 mTERF 1.5e-16 No_clan