Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2219 ATGCCTAATTTTCTCCTTGGAAGACTAGCTGCGTCACTTCCTTCTCGTAGGAAGACCCAATTGGGTCGTCTTCTTCTCCAGCACAATGCTTTCCTTTTCCACAGTTCTTTCACTTCCGCTAGATTATCTGAATCAAATCACCAAAATCAGCAGAAACAACAAGGGAACGGATCGTTTACATTGTCTTATCTCATGAATTCATGTGGGTTATCCCCCAAAGTAGCTGTTGAAGTGTCCAAAAAAGTAAAATTGAAAGACGCAGGTGGTCCAGACTCGATGCTTAATCTTCTTAGGAACTACGGATTCTCCGAAACCCAGATTTCGGAACTTGTAATGAAAGTTCCAACAGTGCTTTCAGGAAAGTCTGAGAAGACCTTTTTGCCCAAATTTATGTTTCTCCGGTCTATAGGGTTTTCATGTGGTGACATCCCAAATCTCCTCATTCGTAACCCCGCACTCTTATTCAGGAGCTTAGAGAGATGTATAATCCCTCGTTATGAGGTCCTTAAGGGTGTGCTTCTTGAGGATGAGAAAGTACTTCTAACTATTAAACGTGGAAGAGAGTATTTTCTCTTTCACGAGGTAACAAATCTGGTCCCAAACATGAACGTTTTGAGAGAATATGCAGTGCCTCAATCTTCCATCTCTCTCTTGGTTAAATGTTATACGAGTGTAGCATTCATTAAGCATGAGAAGTTCGTTGAATGTGTCAAGTTGACTAAGGAAACAGGATTTGATCCCTTGAAAACTACATTTATCACGGCACTCTGTGTGTTTGTAAGGATAAACAAGTCATTGTGGGAATCAAAATTGTTGCTCTATGAGAGATGGGGTTTGTCCAGGGATGTCACTCTTTCAACATTCAAAAGATATCCACAATTCATGATGATTTCAGAAGAGAAGATGACAAAATCATTTGAATTTCTTGTGGATAAAATGGGTTGGTCGCCAATCGATATTGCAGTGAGCCCAGGAGTTCTATCCTGCAGCTTGAAGTGGAGAGTTATCCCGAGATGCTCAGTAGCTAAAATTTTGGAGATGAAGGGTTTGATCCAGAAAAGGCCAAGCTTAGGTACCTTAATGAGTATGCCTGAGGAAGCTTTTTTGGAGCGATTTGTTATCAGGTATCAGGAAAATGTTCCACTGCTATTGGAAGTGTATAAAGGTCAAATTGATCCTCTGCATGCAGTTCGGATGTTACAAAGAGGGTGA 1212 0.4084 MPNFLLGRLAASLPSRRKTQLGRLLLQHNAFLFHSSFTSARLSESNHQNQQKQQGNGSFTLSYLMNSCGLSPKVAVEVSKKVKLKDAGGPDSMLNLLRNYGFSETQISELVMKVPTVLSGKSEKTFLPKFMFLRSIGFSCGDIPNLLIRNPALLFRSLERCIIPRYEVLKGVLLEDEKVLLTIKRGREYFLFHEVTNLVPNMNVLREYAVPQSSISLLVKCYTSVAFIKHEKFVECVKLTKETGFDPLKTTFITALCVFVRINKSLWESKLLLYERWGLSRDVTLSTFKRYPQFMMISEEKMTKSFEFLVDKMGWSPIDIAVSPGVLSCSLKWRVIPRCSVAKILEMKGLIQKRPSLGTLMSMPEEAFLERFVIRYQENVPLLLEVYKGQIDPLHAVRMLQRG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2219 403 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Glsi10g2219 403 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Glsi10g2219 403 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Glsi10g2219 403 Gene3D Transcription termination factor 3, mitochondrial 174 380 IPR038538 -
Glsi10g2219 403 FunFam Mitochondrial transcription termination factor-like 158 380 - -
Glsi10g2219 403 PANTHER CGI-12 PROTEIN-RELATED 58 376 IPR003690 GO:0003690|GO:0006355
Glsi10g2219 403 Pfam mTERF 94 246 IPR003690 GO:0003690|GO:0006355
Glsi10g2219 403 Pfam mTERF 263 369 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2219 Glsi-ChrGlsi10 17935145 17936356 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi10g2219 mTERF 8.9e-15 No_clan