Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2218 ATGCAAGTTTTCCTCATCTCAAGATTAATTGCTTCAAATCCATATTTAAGGAAGACCCATCTGGGATTTCTTTACCAGAGTGCTTTCCTTGCTTTCAATTCATTCTCTTCATTTATCTCCTCTAAACCAAATGAAAAATTGAAGAAACGGAGTCAGGAAGGAGATCCCTTCACAGTGTCTTACCTCATTAACTCATGTGGGCTTTCCCCAAAGATAGCCATTCAAGCATCCAAAGGGGTACGATTGGAAAATTATGACAAACCCAACTCGGTTCTTGATCTTCTGAAGAACAATGGGTTTTCTGATACCCAGGTATCAAAAATTGTGAAATTTCTCCCTAGGATCCTTGTTGCTAATCCTGACACAAGCCTTCTGCCCAAATTTAAGTTCTTGCAGTCCATAGGGATTTCAGGCACTGACCTCCCAGAATTTCTGATTTGTAACCCGATGCTCTTAGTGAGGAGCTTAGATGAGTTCCTAATTCCCCGTTATGAAATTCTTAAGCATGTACTTTCTGATGATAAGAATGTTATCAAATCTTTGAAATGTGGAATATGGTCTTTACGTAATGTTGGAGATGATATATTTCTAAACGTAAAACTTTTGAGAGAAGTTGGAGGGTCTCAATCTTCTGTCTGTCTATTGGTAACTAATTTTCCAGATATAGCATTTATGAAGCATACAGAGTTTGTTGAAGCTGTGAAGTCGGCCAAGGAAATGGGATTTGATCCTGCGAAATCATCGTTTGTCTTAGCCATCCAGGTGCTTGCAAAGGTGAAGCCATCCCTGTGGAACTCAAGATTGGAGACTTATAAGAGGTGGGGTTGGTCTGAAAATATTGTTCTTTCAGCTTTCAAAAAGTATCCGAATTGTATGTTATTGTCAGAAGAGAAGATTAATAAGGTGATGAATTTTCTTGTGAATGAAATGGGTTATTTATCTGAAGATATTGCTGTAACCCCAGCAGTTATTTCTTTGAGCCTGGAGAAGAGGATTATTCCTAGATGCTTGGTTATTCGGACTTTGAAATCTAAGGGTTTGGCTAAGAATGGCTGGAAACTTTGTACTTTCCTTCTTAAAACTGAGAAAAACTTTTTGAAGAGTTTTGTTGACAGATTTCAGGACCTGAATAATGTTAAGATGGTCCCTTCAGGTGTCATTCAGTCTTAG 1170 0.3821 MQVFLISRLIASNPYLRKTHLGFLYQSAFLAFNSFSSFISSKPNEKLKKRSQEGDPFTVSYLINSCGLSPKIAIQASKGVRLENYDKPNSVLDLLKNNGFSDTQVSKIVKFLPRILVANPDTSLLPKFKFLQSIGISGTDLPEFLICNPMLLVRSLDEFLIPRYEILKHVLSDDKNVIKSLKCGIWSLRNVGDDIFLNVKLLREVGGSQSSVCLLVTNFPDIAFMKHTEFVEAVKSAKEMGFDPAKSSFVLAIQVLAKVKPSLWNSRLETYKRWGWSENIVLSAFKKYPNCMLLSEEKINKVMNFLVNEMGYLSEDIAVTPAVISLSLEKRIIPRCLVIRTLKSKGLAKNGWKLCTFLLKTEKNFLKSFVDRFQDLNNVKMVPSGVIQS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2218 389 Gene3D Transcription termination factor 3, mitochondrial 186 376 IPR038538 -
Glsi10g2218 389 FunFam Mitochondrial transcription termination factor-like 156 376 - -
Glsi10g2218 389 PANTHER CGI-12 PROTEIN-RELATED 53 371 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 Pfam mTERF 92 244 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 Pfam mTERF 266 365 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Glsi10g2218 389 SMART mt_12 29 69 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2218 Glsi-ChrGlsi10 17914203 17915372 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi10g2218 mTERF 9.1e-21 No_clan