Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2216 ATGCAATTTTTTGGCCTCTCAAGAGTAATTGCTTCAAATCGATATGTAAGGAAGACCCATCCGGGATTTCTTCCCCATAATGTTTTTCTTGCTTTCAATTTATTCTCTTCATTTAGTTCCTCTAAACCAAATGAAAAATCGAAGAGACGAAGGCAGGAAGGAGATCCATTTACAGTGTCCTACCTCATCAACTCATGTGGGCTTTCCCCTAAGATAGCCATCCGAGCATCCAAAGGGGTACGATTGGAAAATTATGACAAACCCAACTCGGTTCTTGATCTTCTGAAGAACAATGATTTTTCTGATACCCAGGTATCAAAAATTGTGAAGTTTCTCCCTAGGATCCTTGTAGCTAATCCTGAGACAACCCTTTTGCCCAAATTCACATTCTTGCAATCTATAGGGATTTCAAGCACTGACCTCCCAGAATTCCTGATTTGTAATCCGTTGCTCTTAGTGAGGAGCTTAGATGAGTTCCTAATCCCCCGTTATGAAATGCTTAAGCATGTACTTTCTGATGATAAGGATGTTATCAAATCTTTGAAATTTGGAATATGGTCTGTACGTAAAAGTGGAGATGACATAGTTCCAAATGTAGAGTTTTTGAGAGAAGTTGGAGGGCCTCAATCTTCTGTCCGTCTATTGGTAACTAATTTTCCAGATATAGCATTTATGAAGCATACAGAGTTTGTTGAAGCTGCGAAGTCGGCCAAGGAAATGGGATTTGATCCTGCAAAACCATCGTTTGTCTTAGCTATCCAAGTGCTTGCAAAGGTGAAGCCACACATGTGGAAGTCAAGATTGGAGACTTATGAGAGGTGGGGTTGGTCTGAAAACATCATTCTTTCAGCATTCAAAAGGCATCCTAATTGTATGTTAATTTCAGAAGAGAAGATCAATAAGGTGATGAATTTTCTTGTAGATGAAATGGGTTATTTATCAGAAGATATTGCTGTAGTCCCAGAAGTTATTTCTTTGAGTCTGGAGAAGAGGATTATACCTAGATGCATGGTTATTCAGCATTTGAAATCTAGGGGTTTGGCTAAGAATGATTTGAGACTTGGTACTTTCCTTCTTATAACTCAGGAAAACTTTTTGAAGTGCTTTGAAGGCAGATTAAAGGACCCAAATAATGGTAAGATGGGTCATTCAGCTGTCATTCATAGGTTTTAA 1173 0.387 MQFFGLSRVIASNRYVRKTHPGFLPHNVFLAFNLFSSFSSSKPNEKSKRRRQEGDPFTVSYLINSCGLSPKIAIRASKGVRLENYDKPNSVLDLLKNNDFSDTQVSKIVKFLPRILVANPETTLLPKFTFLQSIGISSTDLPEFLICNPLLLVRSLDEFLIPRYEMLKHVLSDDKDVIKSLKFGIWSVRKSGDDIVPNVEFLREVGGPQSSVRLLVTNFPDIAFMKHTEFVEAAKSAKEMGFDPAKPSFVLAIQVLAKVKPHMWKSRLETYERWGWSENIILSAFKRHPNCMLISEEKINKVMNFLVDEMGYLSEDIAVVPEVISLSLEKRIIPRCMVIQHLKSRGLAKNDLRLGTFLLITQENFLKCFEGRLKDPNNGKMGHSAVIHRF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2216 390 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Glsi10g2216 390 SMART mt_12 282 313 IPR003690 GO:0003690|GO:0006355
Glsi10g2216 390 SMART mt_12 314 348 IPR003690 GO:0003690|GO:0006355
Glsi10g2216 390 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Glsi10g2216 390 FunFam Mitochondrial transcription termination factor-like 156 375 - -
Glsi10g2216 390 Pfam mTERF 92 243 IPR003690 GO:0003690|GO:0006355
Glsi10g2216 390 Pfam mTERF 264 366 IPR003690 GO:0003690|GO:0006355
Glsi10g2216 390 Gene3D Transcription termination factor 3, mitochondrial 173 372 IPR038538 -
Glsi10g2216 390 PANTHER CGI-12 PROTEIN-RELATED 53 367 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2216 Glsi-ChrGlsi10 17904469 17905641 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi10g2216 mTERF 1.5e-18 No_clan