Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2211 ATGGCCGAAGCAGGGAAAGGAGGAAGCTTCAAAGTGAAAATAATCAAGGAAGAAGTTGTGGCTGCGGAGCTGCCATTGCAAGACCATTGGCTCCCACTCTCCAACCTCGACCTCCTCCTCCCGCCGGTGGACGTGAGCGTCTTCTTCTGCTACAACACCATGCCGAGACCCAACGGTGTTAATGCCGGCGAAATGATGATGATGAACTTTGGGTCCATGGTGGAATCTCTGAAGAAGGCCTTGGCTCAGGCTCTGGTTTCCTTCTATGCCTTTGCGGGTGAGGTGGTGCTGAACCCTATGGGCGAGCCTGAGCTGCTATGCAATAATAGTGGGGTTGATTTTGTGGAAGCCGAGGCCGACGTCGAGCTGCGATGCCTCGACTTGCACAACCCAGATGACTCTATTGAAGGCAAGTTTGTTCCTAAGAAGCAGCGTGGGGTGCTTGCGGTTCAGGCCACTTTCCTCAAGTGTGGTGGTTTAGTAGTGGCATGTACTTTTGATCATCGCATCGCCGATGCCTACTCAACTAACATGTTCCTCGTATCATGGGCGGAGATGGCTCAGCCCACCAAGCCCACAGCCTCCACTTCTGATGATGCCGCTCTTCCATGGCAACCATGTTTTCGAAGATCTTTGCTCAGTCCGCGGCGGCCGGGTTCCATCCATCCCTCTCTCAATGACATGTACGTTCCCATTTGTAACCTCCCTCCTCCAAAAAAACCCGAACTCGGATTTGAATCCGACCCACCGATTAGCCGGATCTACTACGTCACAGCTGAAGAACTTAACCATATGCAATCACTCGCAAACTCAAAGGCCATCGTCAATGGCGGGAAGCGAACCAAGCTCGAGTCTTTCTGTGCGTTCTTATGGAAGATGGTTGCTTCTAGTGCCAATGGGAAAAGGGTCATTGTAAAAATGGGGATTGTGGTGGATGGAAGGAAGAGGCTGAGTAATGGCAGCAACCAAGAGAGAGCGTCGCTGATGGCTTCGTATTTTGGGAACGTACTTTCGATACCCTTTGGTGGGAAACCCGTAGAGGAGCTTAAGGAGAAGCCGTTGAGTTGGCTGGCGGATGAAGTTCACAATTTTTTGGAGGCAGCTGTGACAGAGGAGCATTTTCTGGGGTTGATAGATTGGGTGGAGGCTCACCGCCCTGTCACCGTGTTGGCGAGGATCTATAGCAGCGGAGAAGACGATGGGCCAGCTTTCGTAGTGTCGTCCGGGCAAAGGTTTCCAGAAGCTAAGATGGATTTCGGGTGGGGGAAGCCAATGTTGGGGTCATACCATTTTCCGTGGCGCGGCAATGCTGGGTATGTCATGCCGATGCCGAGCCCAGCCGGCAACGGTGACTGGGTGGTGTACATGCATCTTCACAAGGGGCAGTTGGAGATGATAGAGTGTAAGGCTGGTCATGTGTTTAAACCTTTAACTTGGGATTATCTCATCAATCATCCATAA 1461 0.5195 MAEAGKGGSFKVKIIKEEVVAAELPLQDHWLPLSNLDLLLPPVDVSVFFCYNTMPRPNGVNAGEMMMMNFGSMVESLKKALAQALVSFYAFAGEVVLNPMGEPELLCNNSGVDFVEAEADVELRCLDLHNPDDSIEGKFVPKKQRGVLAVQATFLKCGGLVVACTFDHRIADAYSTNMFLVSWAEMAQPTKPTASTSDDAALPWQPCFRRSLLSPRRPGSIHPSLNDMYVPICNLPPPKKPELGFESDPPISRIYYVTAEELNHMQSLANSKAIVNGGKRTKLESFCAFLWKMVASSANGKRVIVKMGIVVDGRKRLSNGSNQERASLMASYFGNVLSIPFGGKPVEELKEKPLSWLADEVHNFLEAAVTEEHFLGLIDWVEAHRPVTVLARIYSSGEDDGPAFVVSSGQRFPEAKMDFGWGKPMLGSYHFPWRGNAGYVMPMPSPAGNGDWVVYMHLHKGQLEMIECKAGHVFKPLTWDYLINHP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2211 486 Pfam Transferase family 10 469 - -
Glsi10g2211 486 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 445 - -
Glsi10g2211 486 Gene3D - 238 468 IPR023213 -
Glsi10g2211 486 Gene3D - 10 227 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2211 Glsi-ChrGlsi10 17792265 17794737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2211 11 467 Monolignol Biosynthesis Gene Families AT5G48930 26.793 6.79e-33 128