Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2210 ATGGCCGAAGCAGGGAAAGGAGGAAGCTTCAAAGTGAAAATAATCAAGGAAGAAGTTGTGGCTGCGGTGCTGCCATTGCAAGACCATTGGCTCCCATTCTCCAACCTCGACCTCCTCCTCCCACCGGTGGACGTGGGTGTCTTCTTCTGCTACAACACCGTGCTAAGAGCCAATGGGGTTAATGCCGACGAAATGACGATGATGAACTTTGGGTCCATGGTGGGATCTCTGAAGAAGGCCTTGGCTCAGGCTCTGGTTTCCTTCTATGCCTTTGCGGGTGAGGTGGTGCTGAACCCTTTGGGCGAGCCTGAGCTGCTCTGCAATAATCGTGGGGTTGATTTTGTGGAAGCCGAGGCCGACGTCGAGTTGCGATGCCTCGACTTGCACAACCCAGATGACTCCATTGAAGGCAAGTTTGTTCCTAAGAAGCAGCATGGGGTGCTTGCGGTTCAGGTGATTTCTCTATATGCATGCATCCATTCAGTCTCTCTCTATATGCTTGCGGTTCAGGCAACTTCCCTCAAGTGTGGTGGTCTAGTAGTGGCATGCACTTTCGATCATCGCATCGCCGATGCCTACTCAGCTAACATGTTCCTCGTATCATGGGCCGAGATGGCTCAACCCACCAAGCGGACGACCTCCACTTCCCACAACGTCTTTCTTCCATGGCAGCCATGTTTTCGGCGATCTCTGCTCAGTCCGCGACGGCCGGGTTTCATCCATCCCTCTCTCTATGACATGTATGTTCCCATTTGTAACCTTCCTCCTCCGAAGAAACCCGAACTCGGATTCGAATCTGACCCCCTTGTCAGCCGGATCTACTACGTCACAGCAGAAGAACTCAACAATATCCAATCACTTGCAAACTCGGAGGCCGTCCTCAATGGTGATAAACGAACCAAGCTCGAATCTTTCTGTGCATTCTTGTGGAAGATGATTGCTTCTAGTGCCAATGGGAAAAGGACCATCGCCAAAATGGGGATTGTGGTGGATGGAAGGAAAAGACTGAGCAATGGTCACAACCAAGAGAAAGCACTGCTAATGGGTTCGTATTTTGGGAACGTACTTTCAATACCCTTTGGTGGGAAACCGATAGAAGAGCTGACGGATAAACCTTTGAGTTGGGTGGCGCATGAAGTTCACCGGTTCTTGGAGGCAGCTGTAACGGAAGAGCATTTTCTGGGGCTGATAGATTGGGTGGAGGCTCATCGCCCTGTCATAGGGTTGGCGAGGATCTATTGCGGTGGAGAAGAAGATGGGCCAGCTGTTGTGGTGTCATCCGGTCAAAGGTTCCCAGAAGCTAAGGTCGATTTTGGGTGGGGGAAGCCTGTGTTCGGGTCGTACCATTTTCCATGGCGTGGCAACGCCGGTTATGTCATGCCGATGCCAAGCCCGACCGGCAACAGTGACTGGGTGGTGTACATGCATCTTCGCAAGGGGCAGTTGGAGATGATAGAGTGTGAGGCTGGTCGGGTGTTTAAACCCTTAACTTGGGATTACCTCATTAATCATCGATAA 1518 0.5152 MAEAGKGGSFKVKIIKEEVVAAVLPLQDHWLPFSNLDLLLPPVDVGVFFCYNTVLRANGVNADEMTMMNFGSMVGSLKKALAQALVSFYAFAGEVVLNPLGEPELLCNNRGVDFVEAEADVELRCLDLHNPDDSIEGKFVPKKQHGVLAVQVISLYACIHSVSLYMLAVQATSLKCGGLVVACTFDHRIADAYSANMFLVSWAEMAQPTKRTTSTSHNVFLPWQPCFRRSLLSPRRPGFIHPSLYDMYVPICNLPPPKKPELGFESDPLVSRIYYVTAEELNNIQSLANSEAVLNGDKRTKLESFCAFLWKMIASSANGKRTIAKMGIVVDGRKRLSNGHNQEKALLMGSYFGNVLSIPFGGKPIEELTDKPLSWVAHEVHRFLEAAVTEEHFLGLIDWVEAHRPVIGLARIYCGGEEDGPAVVVSSGQRFPEAKVDFGWGKPVFGSYHFPWRGNAGYVMPMPSPTGNSDWVVYMHLRKGQLEMIECEAGRVFKPLTWDYLINHR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2210 505 Gene3D - 7 245 IPR023213 -
Glsi10g2210 505 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 464 - -
Glsi10g2210 505 Pfam Transferase family 10 488 - -
Glsi10g2210 505 Gene3D - 257 487 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2210 Glsi-ChrGlsi10 17769057 17771043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2210 11 486 Monolignol Biosynthesis Gene Families AT5G48930 25.926 8.63e-31 122