Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2208 ATGAACCTCAAGCACCCCATGCTTCTTCTTAAGAACAAGCTTGCCTTTACACCACCTCACCGGCAAAGGCATAGAAGGAAACCAGAGCCTGAGCCAAGACATTCTTTAAAGATCCCACCATGGACCCAAAGTTCATCATCATCGTTTAATGCTGGCGGATCTCGGTATAGTGTTGTATCAGAAAAAGACGCCCACGTCCAGCGGTGGGAGGAGGAGGTCAAGGTTGGAGAGTGGGAGCCAATGGCTATGAAGACCAACTTTAGGGCTCACTTGACTTCCGATCTTTCCTGGGAACGCTTAGCGCGAATGCAATTCGTTCTCAAGTCCTCTGCGTCTCTGGCTCAAGCTGTGGTTGTCAGCATAGCTCAGCCATGGCGCTTACCGGGGAGCCAGCTCAAGCCAACAATGGCGAACTACCTAGTGGCTCAGCTTCAAGAGTTCCTTGGGAGGAAAGAACTTGATAGACATCTTGATGCTGATGAAGCTATAGTTCTTGGTGCAGCTCTCCATGCCGCAAATTTAAGTGATGGAATCAAATTGAACCGTAAGCTAGGAATGGTTGATGGTTCAATGTATGGATTTGTGGTTGAGTTGGATGGTCCTGATCTTTTGAAAAATGAAAGCTCTAAGCAGCTACTTGTACCAACAATGAAAAAACTACCAAGCAAGGTGTTCAGATCCATTAAGCATAACAAAGATTTTGATGTTTCACTAGCTTATGAGAGTGAAAATCTATTGCCACGTGGTGTTACCTCTACCGAAGTTGTTCGATATCAAATATCTGGTTTGACAGATGCTGGTGAGAAGATGGTGGGATCTGGAATGCCTTTATCAAAAGAGTTTCTTGCTGAAGCTAAAGGCAAATTAGAGGCATTGGACAAAAAAGATGCAGAAAGAAGAACAGCAGAATTAAAAAATAATTTGGAAGGGTATATATATACAACTAAGGAAAAGGTTGATTGTGCAAAAGTTTCTACCAGTGATGAGCGCCAATCCTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAATGCTATAGAGTTTCAAGAGCATCTAGATATGTTAAAAGTAGTAGGTGATCCAATTTTCTTCAAGTCTGATGTATTCACCGTTATAGTATGGTTGAAGGAGCTCACAACTCGACTAGTGACAGCTGAGCATGCTCGTTGA 1194 0.4338 MNLKHPMLLLKNKLAFTPPHRQRHRRKPEPEPRHSLKIPPWTQSSSSSFNAGGSRYSVVSEKDAHVQRWEEEVKVGEWEPMAMKTNFRAHLTSDLSWERLARMQFVLKSSASLAQAVVVSIAQPWRLPGSQLKPTMANYLVAQLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSMYGFVVELDGPDLLKNESSKQLLVPTMKKLPSKVFRSIKHNKDFDVSLAYESENLLPRGVTSTEVVRYQISGLTDAGEKMVGSGMPLSKEFLAEAKGKLEALDKKDAERRTAELKNNLEGYIYTTKEKVDCAKVSTSDERQSFVEKLDQVQDWLYTDGEDANAIEFQEHLDMLKVVGDPIFFKSDVFTVIVWLKELTTRLVTAEHAR 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2208 397 PANTHER HSC70CB, ISOFORM G-RELATED 142 270 - -
Glsi10g2208 397 Pfam Hsp70 protein 282 370 IPR013126 GO:0005524|GO:0140662
Glsi10g2208 397 FunFam Heat shock 70 kDa protein 4 277 379 - -
Glsi10g2208 397 MobiDBLite consensus disorder prediction 38 53 - -
Glsi10g2208 397 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 303 373 IPR029048 -
Glsi10g2208 397 Gene3D - 278 376 IPR029048 -
Glsi10g2208 397 MobiDBLite consensus disorder prediction 13 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2208 Glsi-ChrGlsi10 17718480 17723335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2208 144 371 Calmodulin-binding Proteins AT3G12580 26.119 4.49e-08 53.1