Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2207 ATGGCTGAAGCAGGGAAAGGAGGAAGCTTCAAAGTGAAAATAATCAAGGAAGAAGTTGTGGCTACGGTGCTGCCATTGCAAGACCATTGGCTCCCATTCTCCAACCTCGACCTCCTCCTCCCACCGCTGGACGTGGGCGTCTTCTTCTGCTACGACACCGTGCCAAGAGCCACCGGGGTTAATGCCGACGAAATGATGACGAAGAACTTTGCGTCCATGGTGGGATCCCTGAAGAAGGCCTTGGCTCAGGTTCTGGTTTCCTTCTATGCCTTTGCGGGTGAGGTGGTGCTGAACCCTTTGGGCGAGCCTGAGCTGCTATGCAATAATCGTGGGGTTGATTTTGTGGAAGCCGAGGCCGACGTGGAGCTGCGATGCCTCGACTTGCACAACCCAGATGACTCTATTGAAGGCAAGCTTGTTCCTAAGAAGAAGCATGGGGTGCTTGCGGTTCAGGTGATTTCTCTATATGCATCCATTCAAAGACTCTCTGCCACTTCCCTCAAGTGTGGTGGTTTAGTAGTGGCATGCACTTTTGATCATCGCATCGCCGATGCCTACTCAGCTAACATGTTCCTCGTATCATGGGCCAAGATGGCCCAGCCCACCAAGCCCACAACCTCCATTCCCCACGATGCTGCTCTTCCATGGCAACCATGTTTTCGGCGATCTTTGCTCAGTCCACGGCGGCCAGGTTCCATCCATCCCTCTCTCGATGACATGTACGTTCCCATTTGTAACCTCCCTCCTCCGAAGAAACATGAAATCGGATTTGAATCCGACCCCCTCATCAGTCGGATTTACTACATCACAGCTGAAGAACTCAACCGTATGCAATCACTTGCAAACTCAAAAGCTATCGTCAGTGGCGGGAAGCGAACCAAGCTCGAGTCTTTCTGTGCATTCTTGTGGAAGATGGTTGCTTCTAGTGCTAATGAGAAAAAGGTCATTGCCAAAATGGGAATTGTGGTGGATGGAAGGAAAAGACTGAGCAATGGCGGCAACAACGAGAAAGCGTCGTTGATGGGTTCGTATTTTGGGAATGTGCTTTCGGTACCCTTTGGCGGGAAATCGGCAGGGGAGCTGATACAGAAGCCGTTGAGTTGGGTGGCAGATGAAGTTCACAGGTTCTTGGAGGCGGCTGTGACGGAGGAGCACTTCTTGGGGCTGATAGATTGGGTGGAGGCTCATCGCCCTGTCACAGGGCTAGCAAGGATCTATTGCAGTGAAGAAGAAGATGGGCCAGCTGTTGTGGTATCATCTGGGCAAAGGTTCCCACAAGCTAAGGTGGATTTCGGGTGGGGGAAGCCAGTTTTCGGGTCGTACCATTTTCCGTGGCATAGCAATGCCGGGTATGTCATGCCGATGCCGAGCCCAGCCGGCAACGGTGACTGGGTGGTGTACATGCATCTTCCCAAGGGGCAGTTGGAGATGATAGAGTGTGAGGCTTGTCACGTGTTTAAACCCTTAACTTGGGATTACCTCGTAAATCATCGATAA 1497 0.519 MAEAGKGGSFKVKIIKEEVVATVLPLQDHWLPFSNLDLLLPPLDVGVFFCYDTVPRATGVNADEMMTKNFASMVGSLKKALAQVLVSFYAFAGEVVLNPLGEPELLCNNRGVDFVEAEADVELRCLDLHNPDDSIEGKLVPKKKHGVLAVQVISLYASIQRLSATSLKCGGLVVACTFDHRIADAYSANMFLVSWAKMAQPTKPTTSIPHDAALPWQPCFRRSLLSPRRPGSIHPSLDDMYVPICNLPPPKKHEIGFESDPLISRIYYITAEELNRMQSLANSKAIVSGGKRTKLESFCAFLWKMVASSANEKKVIAKMGIVVDGRKRLSNGGNNEKASLMGSYFGNVLSVPFGGKSAGELIQKPLSWVADEVHRFLEAAVTEEHFLGLIDWVEAHRPVTGLARIYCSEEEDGPAVVVSSGQRFPQAKVDFGWGKPVFGSYHFPWHSNAGYVMPMPSPAGNGDWVVYMHLPKGQLEMIECEACHVFKPLTWDYLVNHR 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2207 498 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 457 - -
Glsi10g2207 498 Pfam Transferase family 10 482 - -
Glsi10g2207 498 Gene3D - 249 480 IPR023213 -
Glsi10g2207 498 Gene3D - 10 239 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2207 Glsi-ChrGlsi10 17712220 17715086 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2207 11 479 Monolignol Biosynthesis Gene Families AT5G48930 26.261 2.78e-30 120