Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2200 ATGCTAAATGGCTTGTTTGGTTCAAGACATAGAAAGTTTCGCGGTATTTTCAATGGCTTTTGTGCCGTGGTCTTGTTTTTCTTCTTTTACAATCGGGAAGACATTATTCGTAACCCTCTTCTTAGGCAATCCGCATATATGGTAAATCATGAGTCTTCTCACTTTACGGTGATTCACCGTCGAATGGTTGAAATCGGCCTTAACACTTCAAGTATAGTTGATGAGCTTCATGACAATGATTTAGCTGTAAATAATGCTGGATTTTGTACTGGATTGTTCCACCATGATGGTTATTCTAGCCCATGTGAATACTTAAAGGCGAATCCACAATGCAATGCAGGAGGATTTCTTGATTACATAAGGTTTTTATATTGTAAATGTCAAAATTTTAGAGTTCTGGGCTACCTAGTATTGGGTATATGGCTAGCTGCTTTATTTTATCTATTGGGGAACACTGCAGCAGACTTCTTTTGTCCTTCTCTTGAGCATCTGTCAAGGCTCTTGCAATTGCCTCCAACTGTTGCTGGGGTTGTGCTCCTTCCACTTGGGAATGGAGCACCTGATGTGTTTTCCAGTATAGCTGCCTTTGTTGGTACAGACACAGGTGAAGTGGGCCTTAACAGTGTGTTAGGTGGTGCTCTGTTCGTTACTTGTGTTGTTGTTGGAACTGTTTCTCTATGTGTTGCAGAGAAAGGAATTCAAATTGATCGAAGATGCTTCATAAGGGATGTTAGCTTCTTTCTATTCACTCTTTTGTCCCTGTTGCTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGGCAGCCATTGCTTTCGTATCAATTTATGTTTTTTATGCATTTTTTGTTGTGGCAAATGAGATATTTTGGAAACATGCCCGGAGGTTAAAATTGGATTCTGTCACACCATTGCTTCCTGTCCAGGGAGGTATGTTCTCCCTTGGTTCTGAAGAGGATACTTCTGTTTATAGCTCTTTGCTTGACACAGACACTGAAAGTGATCCTCCCCATCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCGAATGTGGCAATTTATTCAAACCAGGCAACTAAAGTCAATTTTTTGGATGATGAAAGGCCTCCTTGGGGATGGAGTGATGGGAATGTGGAAAACAACAGCTCGTCTTTCTCCGTTTCAAAACTGTTTTTATTGATGGAGATGCCATTGACAATTCCTAGAAGGCTAACAATTCCCTTGGTCAATGAGGAAGTATGGTCAAAGGCATATGCTGTGGCCAGTGCTTCACTGGCTCCAATTCTCCTGGCCTTTTTGTGGAACACTCAAGATAATGTTGGTTATCTGAGCAGTATACTTTCCTATTGCATTGGTGTTGTTGTTGGATGCACACTTGGTATTCTTGCATACAAATACACTTTATCTGATTATCCACCGCATAGGTTTCTGATTCCCTGGGTTCTTGGAGGATTCCTCATGAGCATTGTGTGGTTCTATATAATAGCAAATGAACTTGTAGCTCTATTGGTGGCATTTGGTGTAATTTTAGGAATTAATCCATCCATCCTGGGATTAACTGTATTAGCATGGGGAAATTCAATGGGGGATTTGATGTCAAATGTTGCATTGGCAATAAATGGAGAAGATGGAGTTCAGATTGCTTTATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCAATGCTGCTTGGGGCCTGGTCAGTGAAACCTGAATCATACGTGGTTCCTGAAGACAATAGTTTATATTACACCATGGGATTTCTTGTCTCAGCACTGCTTTGGGCACTTGTTGTTTTACCTCGCAACGACATGCATCCCAACAGAAAACTTGGAGTGGGTCTCATCACCCTTTATTTGATATTTCTTTCTTTCCGGGTGTGCATTGCTATGGGGTTCATATCAGTGGCTGGCCTCAGTGCAAGGAACCTAACTGGCCAGATGGGGAAGAAGAAGTTCATCGACAAGAAAAAGTCGGCGACTTTCCAATTACTCGCACGCGACTCCTCCGATCCCAACTACGATGAAACTCCCGGCAGTGACCGTATTTTTGTCCGCGTCGACAATAACCCTGTCTCTTTAGGAAGCTACATCGGCGCCGACGAACAGTACGGTGTCTCTGGCGGTGGTGATGATCCCAATTCGATATTCGATGATGCGCCTGAGGACAATGAGGATGACGAGAACGATGGCAGGGTTCTGGGGAGCTCGATGATGGGGTGGAGTGGGCATGCGGGTATGGTTGCTCAGCCATTGCCGGACCATGTGAGGAGGGAGATTTTGGAACTGGGGTTTCCGGATGATGGGTATAATTACTTAACCCATTTGAGGGAGATTAAGAATACTGGTGGTGGCTCCGCATTTTATCATAATCCCAAGTTTAGAGTTGATCACGTTCCTAATGATGTGAAGGCTTATGATGCTTCGAGATTACAAATTTCCGGAGTGAATGAAGAGGTCAACGACAAGTCTATGTACAGTGTTGCATCCAAGACTACAAGTGTAAGGATGCAGAAAGGTGTTGATCCTGAAGTAGCTGCGTTGCTTGATGATAGTGATTTGTCTCGGTTTGGCTCTGATGTTGAAGACTTGGAGGAAGACTTCGTTGTTCAGGCAAACTTTCCTGAAGAAGAAGAGAAGCCACACATATGTAATAGGATGAATTTGGCTGAGGAATTCATGATCAATAGAAACAATGCAGAAATATTGCATGCTTCTGCTAGTTCCAAAGTTGCAGATGATCATGAATCCCTGGAAGGAGTGACAAATGATGTTACAGGAGTTGACTGTGTCAGTGAGAAGCCAAGAGTTCGTCGTCTTTTGGATGAGCAATTTGATTTGCTTGAAAGTCAGGAGTATGGAGATGATGATGATGATTATGACTTTTATCGAGCTGAAGAAGACGAATCTCTTGCTGAGAAGCTCAAACACACTCTTAAGGACCATGTGGTGGATGACCTAGAATTCAATGATGACAACTATAAGGTTCCTGCAGATTTATTGAAGGATAAAGAGGCACCGAAAAGTGAAGAGCAAGAGGAGTCTGCTGCTGCTGATGTAATTCGCCGTTGCAAGGAATATGCTGAGAGTTATGAAATTGAAGATGAAGACAAGGATGTTGTTGTTGAGGAAAGTAGTGATGAATCAGAAGTTTGGGATTGTGAGACAATTGTTTCTACATACTCAAATCTAGATAATCACCCTGGAAAGATTGAAGCACCTGAAGTTACTAGGAAAAAGAAATTGGCCGAAACTGTGTCTGTAGCCTTGAGTTCCTCTAGTCATGTAATATCCCTTAAAGGAAAAGAGAAACTCCCTGTGGACTTCTTGGCGGGTAGTAGAAAATCTACTGCAGAAAAGGTGAAAGGCGGGGGCACCATGAGAACTGAACAGCACAAGAGAAATCAACATGGCCAAGAGTCAAAGGAGGAGAAGAAAGAACGGAAGGCTGCTGTAAAGGAGGATCGGCGTGAGGCACGCCGCATGAAGAAAGAAATGAAGGGGCTTTACAAGGGTGAAGCACACCGGGCACAAAGAGTTGCTGCCATATCCGGTCCTTCTTCCATTCATCTTTTGTAA 3594 0.4318 MLNGLFGSRHRKFRGIFNGFCAVVLFFFFYNREDIIRNPLLRQSAYMVNHESSHFTVIHRRMVEIGLNTSSIVDELHDNDLAVNNAGFCTGLFHHDGYSSPCEYLKANPQCNAGGFLDYIRFLYCKCQNFRVLGYLVLGIWLAALFYLLGNTAADFFCPSLEHLSRLLQLPPTVAGVVLLPLGNGAPDVFSSIAAFVGTDTGEVGLNSVLGGALFVTCVVVGTVSLCVAEKGIQIDRRCFIRDVSFFLFTLLSLLLILVVGKVGVGAAIAFVSIYVFYAFFVVANEIFWKHARRLKLDSVTPLLPVQGGMFSLGSEEDTSVYSSLLDTDTESDPPHLPPSLPQWMWSSNVAIYSNQATKVNFLDDERPPWGWSDGNVENNSSSFSVSKLFLLMEMPLTIPRRLTIPLVNEEVWSKAYAVASASLAPILLAFLWNTQDNVGYLSSILSYCIGVVVGCTLGILAYKYTLSDYPPHRFLIPWVLGGFLMSIVWFYIIANELVALLVAFGVILGINPSILGLTVLAWGNSMGDLMSNVALAINGEDGVQIALSGCYAGPMFNTLVGLGISMLLGAWSVKPESYVVPEDNSLYYTMGFLVSALLWALVVLPRNDMHPNRKLGVGLITLYLIFLSFRVCIAMGFISVAGLSARNLTGQMGKKKFIDKKKSATFQLLARDSSDPNYDETPGSDRIFVRVDNNPVSLGSYIGADEQYGVSGGGDDPNSIFDDAPEDNEDDENDGRVLGSSMMGWSGHAGMVAQPLPDHVRREILELGFPDDGYNYLTHLREIKNTGGGSAFYHNPKFRVDHVPNDVKAYDASRLQISGVNEEVNDKSMYSVASKTTSVRMQKGVDPEVAALLDDSDLSRFGSDVEDLEEDFVVQANFPEEEEKPHICNRMNLAEEFMINRNNAEILHASASSKVADDHESLEGVTNDVTGVDCVSEKPRVRRLLDEQFDLLESQEYGDDDDDYDFYRAEEDESLAEKLKHTLKDHVVDDLEFNDDNYKVPADLLKDKEAPKSEEQEESAAADVIRRCKEYAESYEIEDEDKDVVVEESSDESEVWDCETIVSTYSNLDNHPGKIEAPEVTRKKKLAETVSVALSSSSHVISLKGKEKLPVDFLAGSRKSTAEKVKGGGTMRTEQHKRNQHGQESKEEKKERKAAVKEDRREARRMKKEMKGLYKGEAHRAQRVAAISGPSSIHLL 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2200 1197 MobiDBLite consensus disorder prediction 708 736 - -
Glsi10g2200 1197 Gene3D - 170 300 IPR044880 -
Glsi10g2200 1197 Gene3D - 404 633 IPR044880 -
Glsi10g2200 1197 Pfam Sodium/calcium exchanger protein 480 631 IPR004837 GO:0016020|GO:0055085
Glsi10g2200 1197 Pfam Sodium/calcium exchanger protein 140 283 IPR004837 GO:0016020|GO:0055085
Glsi10g2200 1197 MobiDBLite consensus disorder prediction 1130 1179 - -
Glsi10g2200 1197 MobiDBLite consensus disorder prediction 1121 1179 - -
Glsi10g2200 1197 FunFam Cation/calcium exchanger 5 417 633 - -
Glsi10g2200 1197 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 50 640 - -
Glsi10g2200 1197 Coils Coil 1147 1170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2200 Glsi-ChrGlsi10 17639376 17649698 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2200 89 637 Antiporters AT5G17850 42.572 1.62e-114 366