Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2198 ATGGGAAAAACCTACATCTTCTGGCTCTTCTTCATTGAAATCCTACTCCAAATTTCCTTATCAAGAGGTGGCAAAGTTCCTGCAATTATAGTGTTTGGAGACTCCTCAGTGGATTCAGGAAACAACAACTTCATTCCAACCATTGCTAAGAGCAACTTTGAGCCCTATGGCCGTGACTTCTTTGGGGGGTACCCTACGGGGCGTTTCTCCAATGGCCGCATCGCCCCCGACTTCATCTCTGAGGCCTTTGGTCTTAGACCAACAGTTCCTGCTTACTTGGATCCTGCTTATAACATATCAGATTTCGCTTCTGGAGTTTGCTTTGCCTCAGCTGGAACTGGCTTTGACAATGCTACTTCAAATGTTGCAGATGTGATACCTCTATGGAAAGAAGTGGAGTACTACAAGGAGTACCAGAAGAAACTGAAGGAAAATCTTGGAGAAGAGAAGGCAAATGAGATAATAACAGAGGCTTTGTATTTGGTTAGCATTGGAACAAACGATTTCCTTGAGAACTACTACACTTCCCCAGAGCGTCAGTGCCAGTTCACTGTGCAGCAATATGAGGATTTTCTGATAGGGCTTGCCGACAATTTCCTGAGAGGGCTTTATGAGCTCGGAGCAAGGAAAGTTTCCTTTACAGGGGTCCCTCCAATGGGGTGCCTGCCCTTGGAAAGGACCATGAATATGCTGGACTACAATGGCTGTGTGGAGGAGTACAACAATGTTGCTTTGGAGTTCAACGGGAAGTTGGGTTGTTTGGTCACAAAGCTTAACAAGGAGCTTCCCGGGTTTCAGTTGGTTTCTGCAAATCCATATGACCTCTTGGTGCAAATGATCACAAAACCTTCTCGTTTTGGTTTTGAGGATGCAAGTGTGGGATGCTGTGGAACTGGGAGATTTGAGATGGGTTTCCTATGCGACCCAAATAGTCCATTTACATGCACAGATGCAAATAAGTATGTATTCTGGGATGCTATCCACCCCACAGAGAAAACAAGTCAGATAGTCTCAAATTACCTCATTAAAAAATATCTAGCAATGTTTCTTTGA 1053 0.4444 MGKTYIFWLFFIEILLQISLSRGGKVPAIIVFGDSSVDSGNNNFIPTIAKSNFEPYGRDFFGGYPTGRFSNGRIAPDFISEAFGLRPTVPAYLDPAYNISDFASGVCFASAGTGFDNATSNVADVIPLWKEVEYYKEYQKKLKENLGEEKANEIITEALYLVSIGTNDFLENYYTSPERQCQFTVQQYEDFLIGLADNFLRGLYELGARKVSFTGVPPMGCLPLERTMNMLDYNGCVEEYNNVALEFNGKLGCLVTKLNKELPGFQLVSANPYDLLVQMITKPSRFGFEDASVGCCGTGRFEMGFLCDPNSPFTCTDANKYVFWDAIHPTEKTSQIVSNYLIKKYLAMFL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2198 350 Gene3D SGNH hydrolase 17 347 IPR036514 -
Glsi10g2198 350 SUPERFAMILY SGNH hydrolase 159 343 - -
Glsi10g2198 350 FunFam GDSL esterase/lipase APG 19 346 - -
Glsi10g2198 350 Pfam GDSL-like Lipase/Acylhydrolase 29 341 IPR001087 GO:0016788
Glsi10g2198 350 CDD SGNH_plant_lipase_like 27 345 IPR035669 -
Glsi10g2198 350 PANTHER GDSL ESTERASE/LIPASE EXL3 12 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2198 Glsi-ChrGlsi10 17625204 17629011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2198 24 343 Pollen Coat Proteome AT1G75910 36.533 6.62e-65 207