Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2194 ATGTCCATAGAGGAACGAAGTGGCCGCTTGGGACAAAAATTGAAGACACGCTCAGGCAGTTGCTACTTCTCTCTGCCTCTTTCGTCCCAAATGGTTACCTTCAGGTTTCACCAGTACCAGGTCGTGGGGAGAGCTCTTCCCACTGAAACCGACGAGCATCCTAAGATCTACCGGATGAAGCTTTGGGCCACCAATGAGGTCCGCGCGAAATCCAAGTTCTGGTATTTCTTGAGAAAGCTGAAGAAGGTCAAGAAAAGCAATGGACAAGTGCTAGCCATCAACGAGATCTTTGAGAAAGATCCAACGAAGATTAAGAACTACGGAATTTGGCTGCGATATCAGAGTCGAACTGGTTATCACAACATGTACAAGGAATATCGAGACACCACTCTCAATGGTGCCGTTGAACAAATGTACAACGAAATGGCATCTCGTCACCGGGTGAGGTTTCCGTGCATCCAGATCATTAAGACTGCCACCATCCCAGCAAAGCTGTGCAAAAGGGAGTGCACCAAGCAGTTCCACAATTCTAAAATCAGGTTCCCCTTGGTGTTCAAGAAGGTTAGGCCACCAAGTAGGAAGCTGAAGACAACATACAAGGCATCAAGGCCCAACTTGTTTATGTGA 627 0.4737 MSIEERSGRLGQKLKTRSGSCYFSLPLSSQMVTFRFHQYQVVGRALPTETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKDPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRECTKQFHNSKIRFPLVFKKVRPPSRKLKTTYKASRPNLFM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2194 208 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 37 158 IPR023573 GO:0003735|GO:0005840|GO:0006412
Glsi10g2194 208 Gene3D - 27 101 - -
Glsi10g2194 208 PANTHER 60S RIBOSOMAL PROTEIN L18A 32 207 IPR028877 -
Glsi10g2194 208 PIRSF Ribosomal_L18a 31 208 IPR021138 GO:0003735|GO:0005840|GO:0006412
Glsi10g2194 208 FunFam 60S ribosomal protein L18a 31 101 - -
Glsi10g2194 208 FunFam 60S ribosomal protein L18a 102 177 - -
Glsi10g2194 208 Hamap 50S ribosomal protein L18Ae [rpl18a]. 36 99 IPR028877 -
Glsi10g2194 208 Gene3D - 102 177 - -
Glsi10g2194 208 SUPERFAMILY RplX-like 101 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2194 Glsi-ChrGlsi10 17562026 17565382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2194 24 208 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 88.172 1.49e-122 344