Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2176 ATGGACCAAAAGCAAGAACATGACAGGGAGAACCAGAATAGGTATGGCATTGATATTTCTCTAATCTCTCCCAAAGTCCCAAAAGTAGTTTCGCCAGTTTCATCTGCAGCAGAGGGGGAAGCCATTCGGCGACCTCGTGGCCGGCCTGTTGGCTCTAAAAACAAGCCAAAGCCTCCAATTATTGTGACCCGGGACAGTGCTAACGCACTCCGGGCTCATGCCATGGAAGTGAGCTCAGGCTGTGACGTGAATGAAAGTTTGTTGAACTTTGCAAGGAGGAAGCAGCGCGGCATCTGCATACTCAGTGGAACTGGCTGTGTAACAAATGTAACACTTCGTCAACCAGCTTCATCCGGTGCCACCGTGACCCTTCATGGCCGGTTCGAGATTCTCTCGCTGCTTGGGTCAATCCTGCCTCCACCAGCACCGCCGGGGATTACAGGTCTCACAATCTACTTGGCCAGTGCTCAAGGGCAAGTTGTGGGTGGTGCTGTAGTTGGTGCTCTAATTGCTTCAGGCCCTGTTGTTGTCATGGCTGCATCGTTCATGAATGCTACTTTCGATCGTCTGCCATTGGATGACGATGAAGTTGCTGCTATAATGCCAAATCAGCAGCACTACCAAGGTCCTCACACCCATCATCATCATCATCATCTTGATATCTCGGATTTCTATGGAATGCCTCAGAACTTGCTCACAAATGGTGCAGTGCCTCCTGAGATATACTCTTGGGCACCACCTGGGAGGAACTTTTCAAAATGCTGA 765 0.502 MDQKQEHDRENQNRYGIDISLISPKVPKVVSPVSSAAEGEAIRRPRGRPVGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVNESLLNFARRKQRGICILSGTGCVTNVTLRQPASSGATVTLHGRFEILSLLGSILPPPAPPGITGLTIYLASAQGQVVGGAVVGALIASGPVVVMAASFMNATFDRLPLDDDEVAAIMPNQQHYQGPHTHHHHHHLDISDFYGMPQNLLTNGAVPPEIYSWAPPGRNFSKC 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2176 254 FunFam AT-hook motif nuclear-localized protein 70 211 - -
Glsi10g2176 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 209 IPR014476 GO:0003680
Glsi10g2176 254 CDD DUF296 71 154 IPR005175 -
Glsi10g2176 254 MobiDBLite consensus disorder prediction 32 60 - -
Glsi10g2176 254 Gene3D - 70 207 - -
Glsi10g2176 254 ProSiteProfiles PPC domain profile profile. 67 203 IPR005175 -
Glsi10g2176 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 67 202 - -
Glsi10g2176 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 71 183 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2176 Glsi-ChrGlsi10 17117967 17118731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2176 26 253 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 71.930 2.14e-102 296