Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2171 ATGCAGCAAGATCACAGAAAAAAGAGTTCGATGGAGATGGAATTTTTCTCAGAATATGGGGATGCCAACCGGTACAAAATTCAAGAAGTCGTTGGGAAAGGAAGTTATGGCGTTGTTTGTTCAGCAATCGACAGTCATACTGGAGAAAAAGTGGCTATAAAGAAGATACATGACATCTTTGAGCACATATCTGATGCTGCACGAATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGACATCCTGACATTGTTGAAATCAAACACATTATGCTTCCTCCTTCTAGGAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCCGATCTTCATCAAGTCATAAAAGCCAATGATGACTTAACAAAGGAGCACTATCAGTTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGATCTGAAACCAAAAAATATACTGGCCAATGCAAACAGTAAACTTAAAATCTGTGATTTTGGATTAGCTAGAGTTGCCTTCAGTGATACACCAACTACTGTATTTTGGACGGATTATGTTGCAACCAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTATTAACTGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACTGATCTGCTTGGGACTCCCTCACTGGATACTATATCCCGGGTACGTAATGATAAGGCAAGGAGGTACCTAACTAGCATGAGGAAAAAGCAGCCTGTTCCATTTGTACAAAAATTTCCAAATGCAGATCCTTTAGCACTAAATTTACTGGAAAGATTGCTCGCTTTTGATCCAAAAGATAGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTTAAGGGCCTGGCAAGATTTGAGAGGGAACCGTCTTGTCAACCTATCTCAAAAATGGAGTTTGAATTTGAAAGGCGAAGGGTCACAAAGGAAGAAATACGAGAGTTGATATTCCGAGAGATTCTAGAGTATCATCCTCAATTATCGAAAGACTACACGAATGGAACGGAGAAAATTAATTTCCTTTATCCAAGCGCGGTTGAGCACTTCAGGAAGCAGTTTGCGCATCTTGAGGAAAATGGTAATAAAAATGGGCCAGTTGTGCCACTTGAAAGGAAGCATGTTTCTCTTCCAAGGTCAACAGTTGTACATTCAAATATAGTACAAGAAAAAGAGCAATCAAATGTTGCTCCATGCAAGAACCGGCAAACCGCTGAGGATTGTAATAACTCCACAGATACAGAAACTTCCATGCCAAGGTCCATACAGGGACCACAAAGAATTCTGCCGGCAAAACCTGGCAAAGTTGGGCCAGTTGTTCCATTTGAGTATGGGAGTGTTAACAAGGATTCTTATGATCCAAGGACATTTATCGGAGGTTCTGTGCTTCCTTCTCAAACTGTTCCCCCTGCACATTATTACCAAAGATCCGGCTCCGTAAATCATGAGAGGTCAGCAACAGAAGCTGCAAAAGTTGTGTCTTTGCCAGCCAAACATGCCCAGCAGTGTGGAGTTAATGCCAAAGTAGCACCAGATATAGCTATCAATATTGATACAAACCCTTTTTTTATGACACGAGCTGGAGTGAACAAGATAGAACAGGATGATCGAATAGCGAGTGATACAAACTTGCTGCAGTCAAAGGCTCACTATGGTGGGATTGGTGGTGCTGCTGGGGCCACTGCACATCGAAAGGTCGGGCATGTTCAGTATGGTGTGGCGCGGATGTTTTAG 1839 0.4154 MQQDHRKKSSMEMEFFSEYGDANRYKIQEVVGKGSYGVVCSAIDSHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANSKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFVQKFPNADPLALNLLERLLAFDPKDRPTAEEALADPYFKGLARFEREPSCQPISKMEFEFERRRVTKEEIRELIFREILEYHPQLSKDYTNGTEKINFLYPSAVEHFRKQFAHLEENGNKNGPVVPLERKHVSLPRSTVVHSNIVQEKEQSNVAPCKNRQTAEDCNNSTDTETSMPRSIQGPQRILPAKPGKVGPVVPFEYGSVNKDSYDPRTFIGGSVLPSQTVPPAHYYQRSGSVNHERSATEAAKVVSLPAKHAQQCGVNAKVAPDIAINIDTNPFFMTRAGVNKIEQDDRIASDTNLLQSKAHYGGIGGAAGATAHRKVGHVQYGVARMF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2171 612 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Glsi10g2171 612 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Glsi10g2171 612 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2171 612 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2171 612 MobiDBLite consensus disorder prediction 427 469 - -
Glsi10g2171 612 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Glsi10g2171 612 FunFam Mitogen-activated protein kinase 111 339 - -
Glsi10g2171 612 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 370 - -
Glsi10g2171 612 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Glsi10g2171 612 FunFam Mitogen-activated protein kinase 14 118 - -
Glsi10g2171 612 CDD STKc_TDY_MAPK 24 361 - -
Glsi10g2171 612 MobiDBLite consensus disorder prediction 427 458 - -
Glsi10g2171 612 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2171 612 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2171 Glsi-ChrGlsi10 17071737 17078136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2171 1 445 MAP Kinase Gene Family AT2G42880 85.393 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Glsi10g2171 Pkinase 3.9e-68 CL0016