Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2170 ATGGAACCAGAAACCACAGAGCCCCACACACCCAAACCCATATTTCACACAAAACCAGAGCACACCCACCAAAATTCCGATATGGGTATTGGAGGGTTTCTTCATGGGAAGACTTTGCATGCTCTCCAGCGACGCCGTAGAAGGCGGAGAGAGAGAAGCAGAAGGGAGGCGGCGAAGGAGATGGAGATGATAAAGGATGGGAAGGGTGAAAGAGAAGAAGAGGAGGAGGATAGGGAGGAGATAGAGAGGAAGATTGAGGCATTGCAGAGGATTGTGCCCGGTGGGGAGGGATTGGGTGTGGACAAGCTCTTTGATGAAACTGCTGGGTACATAATGGCTTTGCAGTACCAAGTGAAAAGCTTGAAAGCTCTTAATAGCTTTTTTCAGAGATTGGAGAAGGAGAAGACTATGTTTGGAGGAAGAGCTCTGTTTTTCTATGAAAAGTGGTGCTGGAAGTCCACGGCATTACGTTCGGTCCAGTCCTCAGGATTAACAATGGCGGACGATATGGTTGTTAATGGCGTTGCATCGGCGGGGGATAATGATCAGTCTGGGGAAAATTTTTATTATACAGATCGAAGCGGAAGCGATGTTCATGTTGTAGAATTGACGAAGAAGATCGAGGCATTGGAGCGTGAGAGAGACGATTTGGCGAATGAAAATGCAGAGAGGAAAGAGCAAATCAAGAAATTGACGCTGGAGATTGACGACCTTAGAAGCGATGATGCTGAGATGAGGAAGAAGATGGGAGAAATGGAGAGGGAGGTCGAACAGTCGCAAGAGTCCAGGAAGGCGGTGGAAGTTATTGCGGCGAGAGCAGCTGAGCTGGAGACCGAGGTGGCGAGGCTTCAACACGATTCAATAACTGAGATGAGTGCTGCGGAGGAAGCTAGAGTTGAGGCAGTTGAATTGAGGAAGGCTTTGGGAGACAAAGAATCGAGGGTTGAATATCTGGAGAGGGAAGTAGATGGTTTAAAGAAAGCAAAGGCGGAAAGTGAGGTGAAGGTGAGGGATTTGGAGAGGAAAATCGGGGTTCTGGAAAAGAAGGAAGTTGAGGAAAGAAGCAAGAGAATTAGGGTTGAGGAGGAGATGAGAGAGAAAGTTGATGAAAAAGAGAGGGAAATTCAAGATTTCAGGCGGAAGATTGGAGAGTTGGAAAAGGCTGCAGCAGGGAAGGGATCTGAGTTGGAGAAGTGGGTTGAGGAGAAAAAGCATTTGGAGCAGGCACTGACAGAATCCGAGGATAAGGCAAGAAGTATGGAATCAAATATTGTTCAATTGAGGCATGAAGCAAGTGAAGCAGAGAAGGTTATCAGAGATCTGAAGGAGAAGGCAGTTGAGGCAGTCAATGGAGCTGTAAATGGAATAGATGGTGAAGTGAAGGGGTTGAAGGAATTGAAGTTGCAGTGGCCAGTGGTGGCAGCAGGATCTACAGGAGCTATTGCTGCAGCTGCTGCTGCAATCTATGTTTGCTATGGAAAACAACGTAGGTAA 1494 0.4732 MEPETTEPHTPKPIFHTKPEHTHQNSDMGIGGFLHGKTLHALQRRRRRRRERSRREAAKEMEMIKDGKGEREEEEEDREEIERKIEALQRIVPGGEGLGVDKLFDETAGYIMALQYQVKSLKALNSFFQRLEKEKTMFGGRALFFYEKWCWKSTALRSVQSSGLTMADDMVVNGVASAGDNDQSGENFYYTDRSGSDVHVVELTKKIEALERERDDLANENAERKEQIKKLTLEIDDLRSDDAEMRKKMGEMEREVEQSQESRKAVEVIAARAAELETEVARLQHDSITEMSAAEEARVEAVELRKALGDKESRVEYLEREVDGLKKAKAESEVKVRDLERKIGVLEKKEVEERSKRIRVEEEMREKVDEKEREIQDFRRKIGELEKAAAGKGSELEKWVEEKKHLEQALTESEDKARSMESNIVQLRHEASEAEKVIRDLKEKAVEAVNGAVNGIDGEVKGLKELKLQWPVVAAGSTGAIAAAAAAIYVCYGKQRR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2170 497 Coils Coil 266 286 - -
Glsi10g2170 497 MobiDBLite consensus disorder prediction 54 72 - -
Glsi10g2170 497 Coils Coil 64 91 - -
Glsi10g2170 497 Coils Coil 396 444 - -
Glsi10g2170 497 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 45 128 IPR044660 GO:0006355
Glsi10g2170 497 Coils Coil 200 262 - -
Glsi10g2170 497 Coils Coil 294 356 - -
Glsi10g2170 497 CDD bHLH_AtIBH1_like 84 124 IPR044549 GO:0006355
Glsi10g2170 497 MobiDBLite consensus disorder prediction 39 53 - -
Glsi10g2170 497 Coils Coil 361 388 - -
Glsi10g2170 497 MobiDBLite consensus disorder prediction 1 23 - -
Glsi10g2170 497 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2170 Glsi-ChrGlsi10 17063252 17067094 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2170 49 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 35.065 2.02e-06 44.7