Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2168 ATGGCTGTGGCGAACCAAACAGCCTCACCTTCCACAACCCCGAAAAGGGTTAGCCCCAAAACTGTGGAAGAAGCCTTGAATGCCCTCCTGAAATGGAGAAATTCCAAGTCCCAGGACGAAAAGCCCAAGCTTTTTGACCAAGAAGAGGAGTTCTTTTACCTCATTCTCACCCTCAAGAAAATCCCTCCAAAAGGTCGCGTTAATCCTCATAAGATTCTGCTCCCACATTCTCTTCTCTCCGAATTCTCGGAGCTCTGCTTGATCATCGATGACAGACCCAAGTCGAATCTCACCAAGGACGAGGCGCAGAAGAAGATCAAATCGGAGGGTATTCCCGTCTCTAAAGTTTTGAAGCTCTCGAAGCTCAAGTCTGATTATCGTCCGTTCGAGGCGAAGAGGAAGCTGTGTGATTCTTACAACATGTTTTTCGCCGATAAAGGGGTGATACCCCTGTTGCCGCGGCTATTGGGTAAGCATTTCTTTAAGAAGAAGAAGATTCCAGTGCCATTGAATTTGAAGCATAAGAATTGGAAGGAGCAGATTGAGAAGGCTTGTTCGTCAGCATTATTGTTCCTCAGGACAGGTACTTGTAGTGTGCTGAGAGTTGCCAAAGTATCAATGGAAATGGATGAGATTGTTGAGAATGTGGTTGCTGCTATTAATGGTATTGCAGAGATTGTACCCAGAAAGTGGGGGAATGTGAGGTCGATTCATTTGAAGTTGCTGGAGTCTCTTGCATTGCCCATTTATCAGACAGTTCCGGATATCAAATTGAAGATTGAGGGAGTCAGGGCCAAGGAAGATGGGGCGGTGGAGAAGGTGGAAGGGGGTAAAGAGACTGGTAAAGATGGGGCTAAGAAGCATAAGAACGTGGGAAAGAAGAAGGGAAGGATTCATGAAGTTCAGTATATGGATTCTAATATTGGCGAGGAACTCAATGAAGATGATTCAGATTTTGAGGGTGATGGGAAAGTTGAGGAAGAAGATAGTGAGAATGATGAAATGGGTAGTGGGGTATTGGTGGATAAGAAGAGACAGAAAGCAAATAAAACAGACAAAGGGGCTTCTAGTGATTTGAATAGTGTGAAACGATTGAAGAAGTCAGATAGCGACAATAATAAAGATGGTGTCAAAGGAAAGAAGAAGGATGGGTTATCTGCCAAAGTGATGAAGGGTAGTAAAATCCAGCAAAACAAAAATGAACTACCTTTGGAAGACGCAGAGTCTGGAAAAAAGAAGAAGAAAAGTGGAAAAGTTAAGTCAGAGGGTAGAGATATGAAAGTAAAAGCCAAGAAAACTAAGAAGGCTGCATAA 1314 0.4353 MAVANQTASPSTTPKRVSPKTVEEALNALLKWRNSKSQDEKPKLFDQEEEFFYLILTLKKIPPKGRVNPHKILLPHSLLSEFSELCLIIDDRPKSNLTKDEAQKKIKSEGIPVSKVLKLSKLKSDYRPFEAKRKLCDSYNMFFADKGVIPLLPRLLGKHFFKKKKIPVPLNLKHKNWKEQIEKACSSALLFLRTGTCSVLRVAKVSMEMDEIVENVVAAINGIAEIVPRKWGNVRSIHLKLLESLALPIYQTVPDIKLKIEGVRAKEDGAVEKVEGGKETGKDGAKKHKNVGKKKGRIHEVQYMDSNIGEELNEDDSDFEGDGKVEEEDSENDEMGSGVLVDKKRQKANKTDKGASSDLNSVKRLKKSDSDNNKDGVKGKKKDGLSAKVMKGSKIQQNKNELPLEDAESGKKKKKSGKVKSEGRDMKVKAKKTKKAA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2168 437 Pfam Ribosomal protein L1p/L10e family 30 244 IPR028364 -
Glsi10g2168 437 CDD Ribosomal_L1 22 249 IPR028364 -
Glsi10g2168 437 MobiDBLite consensus disorder prediction 1 20 - -
Glsi10g2168 437 FunFam Ribosomal protein L1p/L10e family 95 186 - -
Glsi10g2168 437 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 24 244 - -
Glsi10g2168 437 MobiDBLite consensus disorder prediction 309 335 - -
Glsi10g2168 437 Gene3D - 95 187 IPR016095 -
Glsi10g2168 437 SUPERFAMILY Ribosomal protein L1 47 250 IPR023674 -
Glsi10g2168 437 MobiDBLite consensus disorder prediction 1 18 - -
Glsi10g2168 437 MobiDBLite consensus disorder prediction 336 388 - -
Glsi10g2168 437 MobiDBLite consensus disorder prediction 273 437 - -
Glsi10g2168 437 MobiDBLite consensus disorder prediction 404 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2168 Glsi-ChrGlsi10 17054202 17055515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2168 138 240 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 28.155 7.11e-09 54.3