Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2166 ATGCTCCGCTTCTCAAATCGTTCGATCTTCCGCACCGTGGAAACACTTCCTCATTTCTACTTATGGAACACCGAAGATGCATCGCAGGTAGACAAGTTCAACCAAGTGCTGACGGCGTTTATGCGTAGCCTAAGAATCACAGCTGCATCTGGTGACTCCCGTCGTAAGTTTGCAGCAGGAAATGCTAAGGGTCCAAGCAATCAAACCATTTATGGTCTTGTTCAGTGCACACCAGACTTGTCCAGGGATGAGTGTGACGTTTGCTTGAGTGGGGCTATCTCAGAAATCCCAAAATGCTGTGATCGCAAGAAAGGTGGTCGGGTAGTTAGACCCAGTTGTAGCATTAGATATGAGTCATACAGCTTTTTCCAAGCAAATGCATCAGCACCACCATTTTTTACTCCACTGTCAAATTCTCCTCCTCCCCTTCCTCCGTTGGCTGCTTCCATCTCCGAATCAGGAAAGAGCAACAAATCACGAACTGTTATTGCCATAGTTGTTCCAATTGTTGCCTTCATGGCACTGCTCATCTGTATCTTCATCTATTTGAGAGTCAATAAGTCAAGGAAAAATATCAAAACTGAAGCTCCGGAAGAAATTAGTTCTGCGGACTCTTTGCAATTGGACTTTGAAACCATCAGAGTGGCAACAAATGATTTTAGCGATGCAAATATGCTTGGAAAAGGTGGATTTGGACTTGTTTACATGGGTAGGCTATATAATGGAAAGGAGATTGCAGTAAAAAGGTTGAGTGGGGATTCTGGCCAAGGTGATGTAGAGTTTAAGAATGAAGTGCTGTTATTGGCCAAGCTTCAACACCGGAATTTGGTTAAGTTAATTGGTTTCTGTCTGGAAAATAGAGAAAGACTACTTGTCTATGAGTTTGTTCCCAACAAAAGCCTTGATTACTTCATCTTTGATCCAATTAAGCGAGATCAATTGAATTGGGAAAAGCGCTTCAAAATCATAGAAGGCATTGCTCGGGGCCTTCTTTACCTTCACCAAGATTCTCGAGTACGGATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTGGATAGTGAGATGAACCCAAAGATATCAGATTTTGGCATGGCACGACTATTTGTAGTGGATCAAACTCAAGGCAATACAAGTAAAGTTGTTGGGACCTATGGATATATGGCACCTGAGTATATCTTGCATGGGCAATTCTCAATAAAGTCAGATGTCTTTAGTTTTGGCGTTCTAGTTTTAGAAATTGTGAGTGGCCAAAAAAATGGTGAATTCTGCAGTGGGGAGAAGATAGAGCACCTAGTAAGCGCTGCTTGGAAAGCATGGAAGGAAGGAATAACCTCAAGTATCCTGGATCCCACGCTGATTAATGCAGGTTCAAGATCTGAAATTATGAGATGCATCCATTTAGGATTACTGTGTGTCCAAGAGAATGTAGCTGAAAGACCAACCATGGCGTCCATTGTAACCATGCTTAGTACCAACTCTGTCACTCTACCATTACCTTCAGAACCTGCTTTTTATTTGTATACAAGTTTACCAGCTATGGACCTATCATCATCAAAAGATCAATCATCAGTAAATGAGGTTACAATTTCAGAGCAGGATCCTCGCTAG 1614 0.4188 MLRFSNRSIFRTVETLPHFYLWNTEDASQVDKFNQVLTAFMRSLRITAASGDSRRKFAAGNAKGPSNQTIYGLVQCTPDLSRDECDVCLSGAISEIPKCCDRKKGGRVVRPSCSIRYESYSFFQANASAPPFFTPLSNSPPPLPPLAASISESGKSNKSRTVIAIVVPIVAFMALLICIFIYLRVNKSRKNIKTEAPEEISSADSLQLDFETIRVATNDFSDANMLGKGGFGLVYMGRLYNGKEIAVKRLSGDSGQGDVEFKNEVLLLAKLQHRNLVKLIGFCLENRERLLVYEFVPNKSLDYFIFDPIKRDQLNWEKRFKIIEGIARGLLYLHQDSRVRIIHRDLKASNILLDSEMNPKISDFGMARLFVVDQTQGNTSKVVGTYGYMAPEYILHGQFSIKSDVFSFGVLVLEIVSGQKNGEFCSGEKIEHLVSAAWKAWKEGITSSILDPTLINAGSRSEIMRCIHLGLLCVQENVAERPTMASIVTMLSTNSVTLPLPSEPAFYLYTSLPAMDLSSSKDQSSVNEVTISEQDPR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2166 537 FunFam cysteine-rich receptor-like protein kinase 10 296 498 - -
Glsi10g2166 537 Gene3D Transferase(Phosphotransferase) domain 1 296 498 - -
Glsi10g2166 537 FunFam Cysteine-rich receptor-like protein kinase 10 17 122 - -
Glsi10g2166 537 ProSitePatterns Protein kinases ATP-binding region signature. 226 248 IPR017441 GO:0005524
Glsi10g2166 537 Gene3D - 16 122 IPR038408 -
Glsi10g2166 537 Pfam Protein tyrosine and serine/threonine kinase 224 490 IPR001245 GO:0004672|GO:0006468
Glsi10g2166 537 Gene3D Phosphorylase Kinase; domain 1 182 295 - -
Glsi10g2166 537 FunFam Cysteine-rich receptor-like protein kinase 10 184 295 - -
Glsi10g2166 537 Pfam Salt stress response/antifungal 28 120 IPR002902 -
Glsi10g2166 537 ProSiteProfiles Protein kinase domain profile. 220 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2166 537 MobiDBLite consensus disorder prediction 517 537 - -
Glsi10g2166 537 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 64 537 - -
Glsi10g2166 537 CDD STKc_IRAK 226 491 - -
Glsi10g2166 537 Pfam Domain of unknown function (DUF3403) 493 537 IPR021820 GO:0004674
Glsi10g2166 537 SMART serkin_6 220 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2166 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Glsi10g2166 537 SUPERFAMILY Protein kinase-like (PK-like) 207 520 IPR011009 -
Glsi10g2166 537 ProSiteProfiles Gnk2-homologous domain profile. 15 122 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2166 Glsi-ChrGlsi10 17023283 17028839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2166 1 537 Receptor kinase-like Gene Family AT4G21410 50.987 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi10g2166 PK_Tyr_Ser-Thr 2.1e-46 CL0016