Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2165 ATGGAAACACTCCCTCATTTCTATTTATGGAACACCGAAGATGCATTGCAGATAGACAAATTCAACCAAGTGCTAACGGCGTTTATGCGTAGCCTGAGAACCACAGCTGCCTCTGGTGACTCCCGTCGTAAGTTTGCAGCAGGAAATGCAAAGGGTCCAAGCAATCAAACCATATATGGTCTTGTTCAGTGCACACCAGACTTGTCCAGGGATGAATGCGACGTTTGCTTGAGTGGGGCTATCTCAGAAATCCCAAAATGCTGTGATCGCAAGAAAGGTGGTAGGGTAGTTAGACCCAGTTGCAGCATTAGATATGAGTCATACAGCTTTTTTCAAGCAAATGCATCAGCACCACCATTTTTTACCCCACTGTCAAATTCTACTCCTCCTCTTCCTCCATCGGCTCATTCTATGTCTGAATCAGCTGAAGCTCAGGATGAAATTAGTTCTGCGGACTCATCTTTGCAATTGGACTTTGAAACCATCAGAGTGGCAACAAACGATTTTAGCGATGAAAATAAGCTTGGACAAGGTGGATTTGGACTTGTTTACATGGGTAGGCTATATAACGGACAGGAGATTGCAGTGAAAAGGTTGAGTGGGGATTCTGGCCAAGGTGATATAGAGTTTAAGAATGAAGTGCTGTTATTGGCCAAGCTTCAACACCGGAATTTGGTTAAGCTAATTGGTTTCTGTCTGGAAAATAGAGAAAGACTACTTGTCTATGAGTTTGTTCCCAACAAAAGCCTTGATTACTTTATCTTTGATCCAATTAAGCGAGAGCCATTGAATTGGGAAAAGCGCTTCAAAATCATAGAAGGCATTGCTCGAGGCCTTCTTTACCTTCACCAAGATTCTCGAATACGGATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTTTGGATGGAGAGATGAACCCAAAGATATCAGATTTTGGCGTGGCACGACTGTTTGTAGTGGATCAAACTCAAGGCAATACAAGTAAAGTTGTTGGGACCTATTTACCAGCTATGGACCTATCATCATCAAAAGATCAATCTTCAGTAAATGAGGTTTCAATTTCAGAGCAGGAACCTCGCTAG 1086 0.4227 METLPHFYLWNTEDALQIDKFNQVLTAFMRSLRTTAASGDSRRKFAAGNAKGPSNQTIYGLVQCTPDLSRDECDVCLSGAISEIPKCCDRKKGGRVVRPSCSIRYESYSFFQANASAPPFFTPLSNSTPPLPPSAHSMSESAEAQDEISSADSSLQLDFETIRVATNDFSDENKLGQGGFGLVYMGRLYNGQEIAVKRLSGDSGQGDIEFKNEVLLLAKLQHRNLVKLIGFCLENRERLLVYEFVPNKSLDYFIFDPIKREPLNWEKRFKIIEGIARGLLYLHQDSRIRIIHRDLKASNILLDGEMNPKISDFGVARLFVVDQTQGNTSKVVGTYLPAMDLSSSKDQSSVNEVSISEQEPR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2165 361 FunFam Cysteine-rich receptor-like protein kinase 10 5 110 - -
Glsi10g2165 361 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Glsi10g2165 361 FunFam Cysteine-rich receptor-like protein kinase 10 133 244 - -
Glsi10g2165 361 MobiDBLite consensus disorder prediction 124 145 - -
Glsi10g2165 361 Gene3D Phosphorylase Kinase; domain 1 133 244 - -
Glsi10g2165 361 ProSiteProfiles Gnk2-homologous domain profile. 3 110 IPR002902 -
Glsi10g2165 361 Gene3D - 5 110 IPR038408 -
Glsi10g2165 361 Pfam Protein kinase domain 170 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2165 361 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 49 335 - -
Glsi10g2165 361 MobiDBLite consensus disorder prediction 342 361 - -
Glsi10g2165 361 MobiDBLite consensus disorder prediction 131 145 - -
Glsi10g2165 361 SMART serkin_6 169 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2165 361 Pfam Salt stress response/antifungal 19 108 IPR002902 -
Glsi10g2165 361 SUPERFAMILY Protein kinase-like (PK-like) 148 335 IPR011009 -
Glsi10g2165 361 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 245 336 - -
Glsi10g2165 361 ProSiteProfiles Protein kinase domain profile. 169 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2165 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Glsi10g2165 361 Gene3D Transferase(Phosphotransferase) domain 1 245 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2165 Glsi-ChrGlsi10 17000299 17009381 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2165 1 335 Receptor kinase-like Gene Family AT4G05200 49.077 3.91e-116 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi10g2165 Pkinase 1.1e-32 CL0016