Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2162 ATGTATGAAACGAACCAACATTTAGCCTTAAGACAATCTAAAGGAATAATGAGTTCAAAATTTTCCAACTCCTTAATCCTCAAACCTTCACCAATGGCTATAGATTTTATGTATTTTCTCTTGTGGGTCTTCTTTCCCTTGGTTGGATTATTTTCTTACAATTTCTTGAGGCAAAAGCAAAGCTGCAAGAGCAAGAAAAGAAAGCTTCCACCAGGGGAAATGGGGCTTCCATGGATAGGGGAGACCATGGAGTTCTTCAATGCACAACGAAGAAACCGATTGTTCGAGGAGTTCGTTGAGCCTCGGATTCAAAAACACGGCAAAATCTTCAAGACAAGGCTAATGGGGTCCGCAACAGTGGTTGTGAATGGAACCGAGGCTAATAGATTCTTCATGTCCAATGAGTTCAAGCTGGTGAAAAGCTCTTGGCCTTCTTCTTCAGTTCAGCTCATGGGCATGGACTCAATCATGGAGAAAGATGGCGATAGGCACCGGAGCCTCCGAGGAGTCATAGGCACGAGCTTCGGCTATTCTGGGCTTAAGGTACTAGTTCCGAAAATTTGCAGCTTTGTTCAGATTCACATCGCTAAAAACTGGCAGGGCCAAGAAAAGATACACCTATACCGTTCCACGAAATGCCTGACTTTTAACATAGTGTTTGAGTGCTTGTTGGGGATCAATGTGGAGACAGCAATGCTTGATACTTTTGAGAGGGTTTTGGAAGGGGTTTTTTCTCCAGCAGTTATGCTTCCTGGGTCTAAGTTTTGGAGAGCAAACAAAGCAAGGGTGGAGATAGAGAAGATGTTGGTGAATGTGGTGAGAGAGAAGAGGAAGGAAATGGAAGGAAGGTTGAAGAAGGAGGAGGATGGAATGCTTCTATCTAAGTTGGTAGCTGGGATGATTGAAGGGGAGATTAGTGAAAAAGAAGTTATAGATAATGTGGTGCTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCCATTGCCATGACTTTCAAGATGCTGGCTCAGCACCCTGGCTGCTACAGCAAACTCCTTCAAGAACATGCTGAGATAAGGAGCAGCAAAATATGGGGTGAGAATCTGACGGTGGAAGACATAAAGAAGATGAAATATACTTGGCAAGTTGCTAGAGAAAGCATGAGACTGTTCCCTCCTATCTTTGGCTCTTTCAGGAAGGCAATTGCTGACATAGATTATGAAGGATTCACAATACCCAAAGGATGGAAGATACTATGGACAGCATATGGGACACATTACAATGCAGTGTATTTTAAGGATCCTTTGAGCTTCAACCCGTGTAGGTTTGAGGAGGCAATACCACCCTATGTGTTTGTTCCCTTTGGAGGAGGGCCAAGAGTTTGTGCAGGGTACCAATTGGCTAAGCTCAATATCCTCATCTTTGTGCATTATGTTGTGACCCAATATGATTGGTCTTTACTGCACCCAGAGGAGCCAATCACGATGGATCCCTTGCCCTTCCCTTCCCATGGAATGCCCATCAAAATTTCACCCAAGAGCCACCGATAA 1533 0.439 MYETNQHLALRQSKGIMSSKFSNSLILKPSPMAIDFMYFLLWVFFPLVGLFSYNFLRQKQSCKSKKRKLPPGEMGLPWIGETMEFFNAQRRNRLFEEFVEPRIQKHGKIFKTRLMGSATVVVNGTEANRFFMSNEFKLVKSSWPSSSVQLMGMDSIMEKDGDRHRSLRGVIGTSFGYSGLKVLVPKICSFVQIHIAKNWQGQEKIHLYRSTKCLTFNIVFECLLGINVETAMLDTFERVLEGVFSPAVMLPGSKFWRANKARVEIEKMLVNVVREKRKEMEGRLKKEEDGMLLSKLVAGMIEGEISEKEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHPGCYSKLLQEHAEIRSSKIWGENLTVEDIKKMKYTWQVARESMRLFPPIFGSFRKAIADIDYEGFTIPKGWKILWTAYGTHYNAVYFKDPLSFNPCRFEEAIPPYVFVPFGGGPRVCAGYQLAKLNILIFVHYVVTQYDWSLLHPEEPITMDPLPFPSHGMPIKISPKSHR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2162 510 Pfam Cytochrome P450 70 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 CDD CYP90-like 102 506 - -
Glsi10g2162 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Glsi10g2162 510 Gene3D Cytochrome P450 58 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS E-class P450 group I signature 103 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PANTHER CYTOCHROME P450 26 64 492 - -
Glsi10g2162 510 FunFam Taxadiene 5-alpha hydroxylase 60 507 - -
Glsi10g2162 510 SUPERFAMILY Cytochrome P450 65 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2162 510 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2162 Glsi-ChrGlsi10 16942750 16945387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2162 32 412 Cytochrome P450 AT2G42850 61.340 1.01e-159 457