Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2144 ATGGCTGCAAGCTTTGCTTCCAAATGTTCTCGTGTGGGCCGTTCTCTGTTTGGGGGGTCAGGCAACAGTTTCTCTGGTTTGTTTACCACATCTCATGAGATGACGTGCTGCAATTTTTTATCTCAGCAGCAGCAGCAACGCACCTTCATACAGATGAGGACTGTTCTCAAGGTTGTAGATAACTCTGGGGCCAAAAAGGTGATGTGCATACAAGCTTTGAAAGGGAAGAAAGGGGCAAGATTAGGTGACACAATAGTAGCATCGGTAAAGGAAGCACATCCGAACGGAAAGGTAAAGAAAGGGAAGGTTGTGTACGGTGTGGTTGTGCGTGCAGCTATGCAACGTGGGCGATGCGATGGCAGTGAGGTCAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGGCAGCCAATTGGAACCAGAGTTTTTGGTCCTGTCCCTCATGAGCTGAGGAAGAAGAAGCATGTCAAGATTCTTACTTTGGCAGGACATATTGCCTAA 507 0.4753 MAASFASKCSRVGRSLFGGSGNSFSGLFTTSHEMTCCNFLSQQQQQRTFIQMRTVLKVVDNSGAKKVMCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRKKKHVKILTLAGHIA 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2144 168 FunFam 50S ribosomal protein HLP, mitochondrial-like 49 168 - -
Glsi10g2144 168 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 50 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi10g2144 168 Hamap 50S ribosomal protein L14 [rplN]. 49 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi10g2144 168 Pfam Ribosomal protein L14p/L23e 50 167 IPR000218 GO:0003735|GO:0005840|GO:0006412
Glsi10g2144 168 ProSitePatterns Ribosomal protein L14 signature. 106 132 IPR019972 -
Glsi10g2144 168 NCBIfam 50S ribosomal protein L14 50 167 IPR005745 GO:0003735|GO:0006412|GO:0015934
Glsi10g2144 168 Gene3D Ribosomal protein L14 49 168 IPR036853 GO:0003735|GO:0005840|GO:0006412
Glsi10g2144 168 SUPERFAMILY Ribosomal protein L14 50 167 IPR036853 GO:0003735|GO:0005840|GO:0006412
Glsi10g2144 168 SMART Ribosomal_L14_2 49 168 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2144 60 151 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 36.364 3.93e-09 50.8