Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2132 ATGAAGCCCCATTTGGGATATTCCAATCTTTTGATTGTACTTCTTCTTGGTTCCACTTCAGTAGCTTTCCTCTCACAAATGACTTTTGCAGCCACAGCCAAGCTCAATAGTGAAGAAGTGAAGGCATTGAAACAGATAGGGAGCAAACTGGGAAAGAAAGACTGGGACTTTGGGGTAGATCCCTGCAGTGGAAAAGGCAACTGGAATAACTCTGATGACGGGAAAGACTTTGCGAACTCTGTGATCTGTGATTGCTCTTTCAATCACAATTCTTCTTGCCATGTTGTAACCATGTACTGCTCTTACACCTCCTCATACTCTGACCTCTTTCTGATTTCCAGTTCCACCAACCATCTGAGTCCGAATTTGGACTTAATCTTTTCTGTTCTATTCTTGAAGGCTCAGAATCTTTCTGGTACTCTCCCACCGGAGTTTTCCAAGCTTCAGTATCTCAAGCAATTGCACCTTACTCGTAACATCATTACTGGCTCTATACCTCAGCAGTGGGCTACCATGCAGTTGGTTGAGCTGAGTATTGAAGGAAACCTGTTTTCAGGCCCAATTCCTCCAGAGATTGGAAAGTTGATCAATTTAGAAAAACTCATTCTGTCATCAAATGCATTCACAGGAGAATTGCCAGTGGCACTTTCTATGTTGACCAAGTTGACTTATTTGAGGATAAGTGACAATAATGTCTCTGGGAGGATACCTGATTTCATAAGCAGATGGACATCAATTGAAAAGCTGCACATGGAGGGTTGCTCACTTGAGGGGCCCATACCTTCTAGCATTTCTGCCTTGACAAGCTTAAGTGATTTAATACTGAGGAAATGCTTGATTAAAGGAGAGATCCCGGAATATATAGGGAATATGGCAAAACTGAAAACCTTAGACTTGAGTTTCAATGACTTGACTGGAGGGATACCTACTTCCTTTGACCAACTTGATAAAGTAGACTTCATGTATCTTACAGGGAACAAGCTAACAGGGACTATACCTGACTGGGTCCTCGGAAGAAACAAAATTATGAATAAAATTCATGCATGCTTGAAAAGAAACTTCCCATGCTCTTCTTCGGCAAATCAATATTCCCTGCGAATCAACTGTGGTGGCAAGGAAGTAAATATCAATAATAATATTTATGAAGGCGACAGAGAAAAAAATGGTGCTTCAATGTTTTATCCTGGTCGGAATTGGGCTCTCAGCAGCACTGGGAACTTCTTGGACAATGATATTGACTCTGATCCCTATACTGTGACCAACACATCTAAACTTTTCAATGTCTCTGTGCTCAATTCAGAACTGTACACAACAGCTCGTGTTTCTCCACTTTCTCTAACATACTATGGACTCTGTCTCATAAATGGAAACTACACTGTAAAGCTCCACTTTGCAGAGATTATATTTATAAATGATAGATCATTTTACAGTCGTGGGAAGCGTATATTTGATGTCTACATCCAGGGGAAGTTGGTCCTGAAGGACTTCAATATAGAGAACGAAGCTGGTGGAACTGATTTTAAACCTCCATCAGGGGATGGAAAGAGAACTTTTGTTATAGTAGCAGTTGGCATAGTAGCTGCTATTGTTGTACTTGTTCTTATGGTCCTAGGTATCTTGAGGAGGAAGGGCTCCTTAGGAGGCAAAGACTCAGTGCATAAAGGAAAAGATCCAGCCTGCAGAGCAAAACTGGACTGGACAACTAGGAAGAATATTTGCCTTGGCATAGCTAGAGCTTTGGCTTATCTCCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACAAGTAACGTGTTGCTCGACAAGGATTTTAATGCTAAAGTGTCAGATTTTGGTTTGGCAAAACTTAATGAAGATGACAATACCCATATCAGCACTCGAGTTGCAGGGACCATGACTGACGTGCAGGATATACTTTCTGATCCAGGATATTCTGCAAATAGTTCCAAATACAAGGCCATAAGAAATCACTTCTGGCAGGATCCAAGCCGAACACAAAGCATGTCGATACGTAGTCTGTATACTGATTCCTCTAGTTCACATATTGAGACAGAAGAAAGCTACCATCTTGTAACTGTTGACTCAGATAAATCAGACAAATGA 2112 0.4096 MKPHLGYSNLLIVLLLGSTSVAFLSQMTFAATAKLNSEEVKALKQIGSKLGKKDWDFGVDPCSGKGNWNNSDDGKDFANSVICDCSFNHNSSCHVVTMYCSYTSSYSDLFLISSSTNHLSPNLDLIFSVLFLKAQNLSGTLPPEFSKLQYLKQLHLTRNIITGSIPQQWATMQLVELSIEGNLFSGPIPPEIGKLINLEKLILSSNAFTGELPVALSMLTKLTYLRISDNNVSGRIPDFISRWTSIEKLHMEGCSLEGPIPSSISALTSLSDLILRKCLIKGEIPEYIGNMAKLKTLDLSFNDLTGGIPTSFDQLDKVDFMYLTGNKLTGTIPDWVLGRNKIMNKIHACLKRNFPCSSSANQYSLRINCGGKEVNINNNIYEGDREKNGASMFYPGRNWALSSTGNFLDNDIDSDPYTVTNTSKLFNVSVLNSELYTTARVSPLSLTYYGLCLINGNYTVKLHFAEIIFINDRSFYSRGKRIFDVYIQGKLVLKDFNIENEAGGTDFKPPSGDGKRTFVIVAVGIVAAIVVLVLMVLGILRRKGSLGGKDSVHKGKDPACRAKLDWTTRKNICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDNTHISTRVAGTMTDVQDILSDPGYSANSSKYKAIRNHFWQDPSRTQSMSIRSLYTDSSSSHIETEESYHLVTVDSDKSDK 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2132 703 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 27 508 - -
Glsi10g2132 703 Pfam Protein kinase domain 565 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2132 703 Pfam Malectin domain 364 505 IPR021720 -
Glsi10g2132 703 FunFam Os07g0541700 protein 556 634 - -
Glsi10g2132 703 SUPERFAMILY L domain-like 92 338 - -
Glsi10g2132 703 Gene3D Transferase(Phosphotransferase) domain 1 549 652 - -
Glsi10g2132 703 SUPERFAMILY Protein kinase-like (PK-like) 563 635 IPR011009 -
Glsi10g2132 703 Gene3D Ribonuclease Inhibitor 52 237 IPR032675 -
Glsi10g2132 703 ProSiteProfiles Protein kinase domain profile. 393 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2132 703 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 332 - -
Glsi10g2132 703 Gene3D - 359 530 - -
Glsi10g2132 703 Pfam Leucine rich repeat 269 328 IPR001611 GO:0005515
Glsi10g2132 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Glsi10g2132 703 Gene3D Ribonuclease Inhibitor 238 353 IPR032675 -
Glsi10g2132 703 SMART tyrkin_6 476 677 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2132 Glsi-ChrGlsi10 16387982 16400953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2132 561 635 Receptor kinase-like Gene Family AT1G53430 73.333 4.33e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi10g2132 Malectin 8.7e-30 CL0202