Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2131 ATGAAGCCCCATTTGGGATATTCCAATCTTCTGGTTTTACTTCTTCTTGGTTCCACTTCATTAGCTTTCCTCTCACAAATGGCTTTTGCAGCCACAGCCAAGCTCAATAGTGAAGAAGTGAAGGCATTGAAAGAGATAGGGAGCAAGCTGGGGAAGAAAGACTGGGACTTTGGTGTAGATCCCTGCAGTGGGAAAGGCAACTGGAATAAGTCTGATGACGGGAACGGCTTTGCGAGCTCCGTAACCTGTGATTGCTCCTTCAATCACAATTCTTCTTGCCATGTTGTAAGCATATTCTTGAAGGCTCAGAATCTTTCTGGTACTCTCCCACCAGGGTTTTCCAAGCTTCAGTATCTTAAGATATTGGACCTTAGTCGAAACATCATTACTGGTTCTATACCTCAGCAATGGGCTACCATGCAGTTGGTTGAGATCTCCTTTATGGGAAACAGATTATCAGGTCCTTTCCCGAAAGTTCTTACCAATATCACAACCCTCAAAAACCTGAGTATTGAAGGAAACCTGTTTTCAGGTCCCATTCCTCCAGAGATCGGAAAATTGATCAATTTACAGAAACTCACTCTGTCATCAAATGCATTCACAGGAGAATTGCCAGTGGCACTTTCTAAGTTGACCAACTTGACTGATTTGAGGATAAGTGACAATAATATCTCTGGGAGGATACCTGATTTCATAAGCAGATGGACATCAATTGAAAAGCTGCACATGGAGGGTTGCTCACTTGAGGGGCCCATACCTTCTAGCATTTCTGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGACCTAAAAGGTAGAGGCTCCACTTTCCCACGATTAAGTAATATGAAATCAATAAAGACAGTAATACTGAGGAAATGCTTGATTAAAGGAGAGATCCCGGAATATATTGGGAATATGGAAAAACTGAAAATCTTAGACTTGAGCTTCAATGACTTGACTGGAGGGATACCTGCTTCTTTTGTCCAACTTGATAAAGTACAATTCATGTATCTTACAGGGAACAAGCTAGCTGGGACAATACCTGGCTGGGTCCTTGGAAGAAACAAAAATATTGATATTTCGGACAATAACTTCAGCTGGGAGAGCTCGAGTCAAGCTGAATGTCCACGAGGGAGTGTAAATTTAGTGGAGAGCTACTCTTCTGTGGATAAACAGAATAAAATTCATGCATGCTTAAAAAGAAACTTCCCATGCTCTTCTTCGGCAAATCAATATTCCGTACGAATTAACTGTGGTGGCAGGGAAGTAAATATCAATAATAATATTTATGAAGATGACAGAGAACAAAGAGGTGCTTCAACGTTTTATCCTGGTCGGAATTGGGCTCTCAGCAGCACTGGGAACTTCTTGGACAATGATATTGACTCTGATCCCTATACTGTGACCAACACATCTAAACTTTTCAATGTCTCTGTACTCAATTCAGAACTGTACACAACAGCTCGTGTTTCTCCACTTTCTCTAACATACTATGGACTCTGTCTCATGAATGGAAACTACACTGTAAAGCTCCACTTCGCAGAGATTATATTTATAAATGATAGATCATTTTACAGTCTTGGGAAGCGTGTATTTGATGTGTACATCCAGGGGAAGTTGGTCCTGAAGGACTTCAATATAGAGAACGAAGCTGGTGGAACTGGTAAGCCCATTGTGAAGATATTCAATGCTACTGTCTTGCAACATACTTTGAAGATTCACTTTTACTGGGCCGGAAAGGGGACAACAGGCATACCCACAAGAGGAATTTATGGACCTCTAATATCTGCAATATCAGTAGACCCTAATTTTAAACCTCCATTAGGGGATGGAAAGAGAACTTATGTAATAGTGGCAGTTGGCATAGTAGCTGTTATTGTTGTACTTGTTCTTATGGTCCTAGGCATCATGAGGAGGAAGGGCTGCTTAGGAGGCAAAGACTCAGTGTATAAAGAGCTTAGAGGTATAGATCTGCAGACGGGATTATTCACATTAAGACAAATCAAAGCAGCAACCAAAAACTTTGATGCTACTAATAAGATTGGGGAAGGTGGCTTTGGTTCTGTATACAAGGGTCTACTATCAGATGGCACTGTAATTGCGGTAAAGCAGCTCTCCTCAAAATCTAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAATTAATATTGATCTATGAGTATATGGAAAATAATTGTCTATCGCGTGCACTTTTTGGAAAAGATCCAGGCTGCAGAGCAAAACTGGACTGGACAACTAGGAAGAATATTTGCCTTGGCATAGCTAGAGCTTTGGCCTATCTCCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACAAGTAACGTGTTGCTCGACAAGGATTTTAATGCTAAAGTTTCAGATTTTGGTTTGGCGAAACTTAATGAAGATGACAATACCCATATCAGCACTAGAGTTGCAGGGACCATAGGTTATATGGCTCCTGAGTATGCCATGCGTGGCCATTTGACTGACAAAGCAGATGTTTATAGTTTTGGGGTGGTTGTATTGGAAACCATTAGTGGAAAGAGCAACACAAATTACAGGCCCGATGAAGAATTTGTGTACCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGAAGTCTACTGGAGCTAGTTGATCCAAATTTGGGTTCAGAATATTCAACTGAGGAGGCCATGGTCATGCTAAATGTGTCTCTCTTGTGCACCAATGCATCCCCCACACTTCGGCCAACAATGTCCCAAGTTGTGAGCATGCTTGATGGTAGGACTGACGTGCAGGATATACTTTCTGATCCAGGATATTCTGCAAATAGTTCCAAATACAAGGCCATAAGAAATCACTTCTGGCAAGATCCAAGCCGAACACAAAGCATGTCGATACATAGTCTGTATACTGATTCCTCTAGTTCATATCTTGGGACAGAAGAAAGCTACCATCTTGTAACTGTTAATTCAGATAGATCAGACAAGTGA 3060 0.4114 MKPHLGYSNLLVLLLLGSTSLAFLSQMAFAATAKLNSEEVKALKEIGSKLGKKDWDFGVDPCSGKGNWNKSDDGNGFASSVTCDCSFNHNSSCHVVSIFLKAQNLSGTLPPGFSKLQYLKILDLSRNIITGSIPQQWATMQLVEISFMGNRLSGPFPKVLTNITTLKNLSIEGNLFSGPIPPEIGKLINLQKLTLSSNAFTGELPVALSKLTNLTDLRISDNNISGRIPDFISRWTSIEKLHMEGCSLEGPIPSSISALTSLSDLRITDLKGRGSTFPRLSNMKSIKTVILRKCLIKGEIPEYIGNMEKLKILDLSFNDLTGGIPASFVQLDKVQFMYLTGNKLAGTIPGWVLGRNKNIDISDNNFSWESSSQAECPRGSVNLVESYSSVDKQNKIHACLKRNFPCSSSANQYSVRINCGGREVNINNNIYEDDREQRGASTFYPGRNWALSSTGNFLDNDIDSDPYTVTNTSKLFNVSVLNSELYTTARVSPLSLTYYGLCLMNGNYTVKLHFAEIIFINDRSFYSLGKRVFDVYIQGKLVLKDFNIENEAGGTGKPIVKIFNATVLQHTLKIHFYWAGKGTTGIPTRGIYGPLISAISVDPNFKPPLGDGKRTYVIVAVGIVAVIVVLVLMVLGIMRRKGCLGGKDSVYKELRGIDLQTGLFTLRQIKAATKNFDATNKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPGCRAKLDWTTRKNICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDNTHISTRVAGTIGYMAPEYAMRGHLTDKADVYSFGVVVLETISGKSNTNYRPDEEFVYLLDWAYVLQERGSLLELVDPNLGSEYSTEEAMVMLNVSLLCTNASPTLRPTMSQVVSMLDGRTDVQDILSDPGYSANSSKYKAIRNHFWQDPSRTQSMSIHSLYTDSSSSYLGTEESYHLVTVNSDRSDK 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2131 1019 Pfam Leucine rich repeat 286 344 IPR001611 GO:0005515
Glsi10g2131 1019 SMART serkin_6 676 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2131 1019 Gene3D Phosphorylase Kinase; domain 1 647 751 - -
Glsi10g2131 1019 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 645 751 - -
Glsi10g2131 1019 Gene3D Transferase(Phosphotransferase) domain 1 752 961 - -
Glsi10g2131 1019 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 235 382 - -
Glsi10g2131 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Glsi10g2131 1019 ProSiteProfiles Protein kinase domain profile. 676 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2131 1019 Gene3D Ribonuclease Inhibitor 163 233 IPR032675 -
Glsi10g2131 1019 Gene3D Ribonuclease Inhibitor 41 162 IPR032675 -
Glsi10g2131 1019 Gene3D - 409 603 - -
Glsi10g2131 1019 SUPERFAMILY L domain-like 87 349 - -
Glsi10g2131 1019 SUPERFAMILY Protein kinase-like (PK-like) 661 948 IPR011009 -
Glsi10g2131 1019 Gene3D Ribonuclease Inhibitor 234 377 IPR032675 -
Glsi10g2131 1019 FunFam Putative LRR receptor-like serine/threonine-protein kinase 752 960 - -
Glsi10g2131 1019 Pfam Malectin domain 414 599 IPR021720 -
Glsi10g2131 1019 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 24 985 - -
Glsi10g2131 1019 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Glsi10g2131 1019 CDD STKc_IRAK 682 950 - -
Glsi10g2131 1019 Pfam Protein tyrosine and serine/threonine kinase 679 948 IPR001245 GO:0004672|GO:0006468
Glsi10g2131 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 412 604 - -
Glsi10g2131 1019 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2131 Glsi-ChrGlsi10 16370633 16383232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2131 217 1010 Receptor kinase-like Gene Family AT1G07650 65.380 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi10g2131 PK_Tyr_Ser-Thr 6.8e-48 CL0016