Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2121 ATGATTTGCTCCCTCAAACAACCTGGCATAGCTTGCAGTAGTTCCGATGTTGTTTTTCGGAGAAAACATTCAGACCCCTTTGGGTCAAGCTTGCTTTTACCTTCCATGCCGGAGGCAAAAAGTCAGAGATGTCTGGTTTCAGTGCATAAACCTTTGCACCTTTCTTCTACGGCTGGGAATTTTACCAAACTGAATTCTGGGTCAGTGAATCCTCGACAAAGTTCGATCAGATGCGAAGCTTTCGAGGCAGACAGATCAAACATTGAAGCAAGCACGCCATCGGAGGCAGCTAAGAAGTTGAAAATTGGAATATACTTTGCTACCTGGTGGGCTCTGAACGTGGTGTTCAATATTTATAACAAGAAGGTTCTGAATGCATATCCGTACCCTTGGCTTACTTCAACTCTCTCACTTGCTTGTGGATCTCTTATGATGTTGATCTCTTGGGCCACGAGGATAGCTGAGGCGCCTAAGACCGATCTCGAATTTTGGAAGACTTTGTTCCCGGTTGCTGTGGCACATACTATTGGACATGTAGCTGCAACGGTTAGTATGTCAAAAGTTGCAGTTTCATTCACCCATATCATCAAGAGTGGTGAGCCTGCTTTTAGCGTCCTGGTTTCAAGATTTCTTTTGGGCGAGTCCTTCCCAGTGCCAGTCTATCTATCCTTAATTCCAATCATCGGTGGATGCGCCCTTTCTGCTGCGACCGAGCTCAATTTCAATATGACTGGATTTATGGGAGCCATGATATCAAATTTGGCATTTGTATTTCGGAACATCTTTTCAAAACGGGGCATGAAAGGAAAGTCTGTCAGCGGAATGAACTACTATGCTTGTTTGTCTATTTTGTCTCTAGCTATTCTTACACCATTCGCAATTGCTGTTGAGGGACCGCAGATGTGGGCTGCCGGATGGCAAACAGCCCTCTCTCAAATTGGACCCCAATTTATATGGTGGGTGGCGGCTCAGAGCGTGTTCTATCATCTGTATAACCAGGTATCATACATGTCTTTGGATGAGATCTCTCCCTTGACATTCAGCATTGGAAACACCATGAAACGTATATCGGTTATAGTCTCCTCAATCATCATCTTCCACACACCCGTTCAGCCCGTCAATGCTCTCGGAGCAGCCATTGCAATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1182 0.4526 MICSLKQPGIACSSSDVVFRRKHSDPFGSSLLLPSMPEAKSQRCLVSVHKPLHLSSTAGNFTKLNSGSVNPRQSSIRCEAFEADRSNIEASTPSEAAKKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPVPVYLSLIPIIGGCALSAATELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2121 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Glsi10g2121 393 Pfam Triose-phosphate Transporter family 100 389 IPR004853 -
Glsi10g2121 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 235 - -
Glsi10g2121 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2121 Glsi-ChrGlsi10 16293000 16296842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2121 1 392 Antiporters AT5G54800 76.559 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g2121 10 16293000 16296842 Glsi10g2121 10 16293000 16296842 ECH