Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2088 ATGACAGCTTCTCCTTTAAAGCCTCGGCTGAAACACTCTTCAAGGCCATTTTCTGAACCAGATTCCCCCTCCTCTGTTTTCTTCCGAAACCAAAAAGGAGGACCCAGAATCATGAGTATTCTCCTTACTTCTTTGCTTTTCCTGATCCCAATCCTCCTTCTACTTAGAACAAGAAAAAGGTCATCAAAAAGGGTCCCTCTCCCTCCAGGTTCGCTGGGAATTCCTATTATAGGACAAAGCCTAGGCCTTCTTCGGGCCATGCGAGCCAACACTGCAGAAAAATGGCTGGAAGAAAGAGTCAAGAAGTATGGTCCAATATCTAAGCTAAACCTATTTGGAAAACCAACAGTTTTCATCCATGGGCAGGCTGCAAATAAGTTTCTGTTCACCGATGATGGTAGCACCATTGCTAACCAGCAAACGCAGTCCATGAAGATGATACTGGGAGATCGGAGTTTGCTGGAGCTGAGTGGCGAAGATCATAAGAGAGTCAGAGGAGCACTTGTATCGTTCTTGAAGCCAGAATCCTTGAAGCGATATGTGGGGAAAATGGATGAAGAAGTTAGGAGGCACCTCGAGATGAATTGGCAGGGGAAACAGCAGGTCACGGTGTTACCCCTGATGAAGACCCTCACATTCAACATAATCTGCTCTCTTCTGTTTGGTCTCGAGAGAGGAAAACAGAGAGATCAATTCCTGGCTTCCTTCCAACAGATGATAGAAGGAATGTGGTCGGTCCCAGTTAACGTGCCCTTCACGCGCTACAACCGCAGCCTCAGAGCAAGCGCAAGAATTCAGAACATGTTGAAGGAGCTTGTGCGCAAGAAGAAGACTGAACTTGAGCAGAAGGGGAGGGCCTCGCCTCAACAAGACCTTATCAATTGCTTGCTTGGCATGCAGGATGAAGATAAAAAGGAAGTGATCACTGAGAATGAAATCATCCACAATGTTATGCTTGTCATGGTTGCTGGGCATGACACTTCATCTGTCCTAATTACCTTCATTGTCCGTCTCTTGGCTAATGAACCTGCTGTTTATGCAGCAGTTCTTCAAGAACAGGAAGAGATAGCAAAAAGTAAGCTCCCAAGAGAACCTCTTACTTGGGAAGACCTTGCCAAGATGAAGTACACCTGGAGAGTAGCAAATGAAACTCTTAGGATGTTTCCTCCTAGCTTTGGTGGCTTCAGAAAGGCTGTCACAGATTTTGAGTATGGTGGATACCTTATACCCAAAGGGTGGCAAATCTTCTGGGTTACAGCAATGACCCACATGGACACTGGGCTCTTCCCAGAACCATCAAAGTTTGATCCTAGTAGATTTGAAAACGCAGCATCCATACCACCCTACTGCTTCGTCCCATTTGGCGGGGGACAAAGAATATGTCCAGGACTTGAGTTTGCTAGGATTGAAACTCTCGTGGCAATCCATTATCTGGTGACTAGGTTCACTTGGAAGCTATGTGCAGACAATTTCTTCAAGAGGGATCCAATACCAGAACCCACACAAGGGCTACCAGTTCAAATTTCGCCCAGGAAACTGTCTTAA 1545 0.4602 MTASPLKPRLKHSSRPFSEPDSPSSVFFRNQKGGPRIMSILLTSLLFLIPILLLLRTRKRSSKRVPLPPGSLGIPIIGQSLGLLRAMRANTAEKWLEERVKKYGPISKLNLFGKPTVFIHGQAANKFLFTDDGSTIANQQTQSMKMILGDRSLLELSGEDHKRVRGALVSFLKPESLKRYVGKMDEEVRRHLEMNWQGKQQVTVLPLMKTLTFNIICSLLFGLERGKQRDQFLASFQQMIEGMWSVPVNVPFTRYNRSLRASARIQNMLKELVRKKKTELEQKGRASPQQDLINCLLGMQDEDKKEVITENEIIHNVMLVMVAGHDTSSVLITFIVRLLANEPAVYAAVLQEQEEIAKSKLPREPLTWEDLAKMKYTWRVANETLRMFPPSFGGFRKAVTDFEYGGYLIPKGWQIFWVTAMTHMDTGLFPEPSKFDPSRFENAASIPPYCFVPFGGGQRICPGLEFARIETLVAIHYLVTRFTWKLCADNFFKRDPIPEPTQGLPVQISPRKLS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2088 514 Pfam Cytochrome P450 68 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 Gene3D Cytochrome P450 56 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 SUPERFAMILY Cytochrome P450 61 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 CDD CYP90-like 99 510 - -
Glsi10g2088 514 PANTHER CYTOCHROME P450 26 64 490 - -
Glsi10g2088 514 FunFam Taxadiene 5-alpha hydroxylase 57 511 - -
Glsi10g2088 514 MobiDBLite consensus disorder prediction 1 25 - -
Glsi10g2088 514 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2088 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2088 Glsi-ChrGlsi10 15426409 15429705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2088 67 415 Cytochrome P450 AT5G36110 38.244 2.24e-79 251