Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2079 ATGGATGAAGATAAAAAGGAAGTGATCATTGAGAATGAAATCATCCACAATGTTATGCTTGTCATGGTTGCTGAGCATGACACTTCATCTGTCCTAATTACCTTCATTGTCCGTCTCTTGGCAAATGAACCTGCTGTTTATGCAGCAATTCTTCAAGACCTTGCCAAGATGAAGTACACCTGGAGAGTAGCAAATGAAACTCTTAGGATGTTTCCTCCTATCTTTGGCGGCTTTAGAAAGGCTGTCACAGATATTGAGTATGGTGGATACCTTATACCCAAAGAGTGGCAACCTCTTCCCAGAACCATCAAGTTTGATCCAAGTAGATTTGAAAACCCAGCATCCAAACCATCCAATTGCTTCATCCCATTTGGCGGAGGACAAAGAATATGTCCAGGATTTGAGTTTGCTAGCATTGAAACTCTCGTGGCAATCCATTATCTGGTGACTAGGTTCACTTGGAAGCTATGTGCAGACAATTTCGTCAAGAGGGATCCAATGCCAGAACCCACACAAGGGCTACCAGTTCAAATTTGGCCCAGAAAACTGTCCTCAGCAGTCATTCACAGAACTGCAAGTTTTCTGATGTACCTAGAATAA 600 0.425 MDEDKKEVIIENEIIHNVMLVMVAEHDTSSVLITFIVRLLANEPAVYAAILQDLAKMKYTWRVANETLRMFPPIFGGFRKAVTDIEYGGYLIPKEWQPLPRTIKFDPSRFENPASKPSNCFIPFGGGQRICPGFEFASIETLVAIHYLVTRFTWKLCADNFVKRDPMPEPTQGLPVQIWPRKLSSAVIHRTASFLMYLE 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2079 199 PRINTS P450 superfamily signature 62 73 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 PRINTS P450 superfamily signature 122 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 PRINTS P450 superfamily signature 24 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 PRINTS P450 superfamily signature 131 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 Gene3D Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 SUPERFAMILY Cytochrome P450 8 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 Pfam Cytochrome P450 104 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 Pfam Cytochrome P450 6 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi10g2079 199 PANTHER CYTOCHROME P450 26 11 168 - -
Glsi10g2079 199 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 124 133 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2079 Glsi-ChrGlsi10 15158231 15160820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2079 4 176 Cytochrome P450 AT3G19270 36.715 8.01e-30 112