Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2053 ATGGTTGATTTGGAAGTTCGGATCCCCACTCCCTTCGACCCATTTGCAGAGGACAAAGAATCTGATGCCGCAGGAGCCAAAGAGTATGTGCATATCAGGATACAACAGAGGAATGGGAAGAAGAGCTTGACCACTGTGCAAGGGCTGAAGAAGGATTTCAGCTACGAGAAGATCCTGAAGGACCTCAAGAAGGAGTTCTGCTGCAACGGGAATGTTGTGCAGGACAAGGAGCTGGGCAAGATCATCCAACTCCAAGGTGATCAGCGCAAGAACGTGTCTCAGTTTCTGGTTCAGGCTGGCCTTGTTAGAAAGGACCGTATTAAGATTCATGGTTTTTGA 339 0.4838 MVDLEVRIPTPFDPFAEDKESDAAGAKEYVHIRIQQRNGKKSLTTVQGLKKDFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDRIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2053 112 SUPERFAMILY eIF1-like 7 112 IPR036877 GO:0003743|GO:0006413
Glsi10g2053 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Glsi10g2053 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Glsi10g2053 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Glsi10g2053 112 Gene3D - 2 112 - -
Glsi10g2053 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Glsi10g2053 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Glsi10g2053 112 NCBIfam translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Glsi10g2053 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2053 Glsi-ChrGlsi10 14752622 14752960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2053 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 80.357 1.03e-65 192