Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2044 ATGTGCTCCTTCACTGTAATCAATGGCATTTCTGCCAAACCTTCCCTTTCTATCTCATTTTCTGTGCCTGTCCATTTTCAGCAAAGCAGATTCCTTCGCGTTCCTTCTGTACTTTTCCCTAAAAACCCCTCTCAATCTTCGTTTCACGCCCCAATTCACTGCGGGCTCCGTGAATTCCGAGAGCGAATTGAAACCGTAAAGAATACACAGAAAATCACCGAGGCCATGAAGCTTGTTGCAGCAGCTAGAGTTCGACGAGCACAAGAAGCCGTCATCAATGGGCGACCCTTCTCGGAGACCCTGGTCGAAGTCTTGTACGACATCAACGTGCGGCTACAAGGAGAAGACATCGATGTTCCTTTGACCAACGTTCGACCCGTTAAGAAAGTTGCTCTTGTCGTCATCACTGCTGATCGAGGTCTGTGCGGTGGCTTCAACAAAGCAGTAACCAAAAAGGCCGAGACCCGGATCGAAGAACTGAAGAATCTCGGGTTGGATTACACAATAATCAGTGTTGGAAAAAAGGGTAATTCGTATTTCAGACGCAGACCTTATATTCCCGTTGATAGGTTCATCGAAGGAGGGGTTTTTCCCACTACCAAAGAAGCTCAAGCTATTGCAGATGATGTTTTTTCAATGTTTGTTAGTGAAGAAGTTGATAAGATTGAACTTGTGTACTCTAAATTCGTGTCATTGGTTAAGTCTGATCCAGTGATTCATACATTGCTTCCATTGTCACCCAAAGGAGAGGTTCGTGATGTGAATGGAAATTATGTTGATGCCCCACAGGATGAGTTCTTCAGGTTGACAACTAAGGAAGGAAAATTGACTGTGGAGAGAGATAGAGGGAAGGAAAGGAGAACAGAATTATCACCCCTTATGCAATTTGAGCAGGACCCAGTTCAGATTCTTGATGCTATGATGCCTCTGTATTTGAACAGTCAAATTTTGCGGGCTTTGCAGGAATCACTAGCAAGTGAGCTGGCTGCAAGAATGGCTGCCATGTCTAATGCCACTGATAATGCAATTGAATTGAAGAAGAATCTTTCAGTTGCCTACAATCGGGAAAGGCAGGCGAAAATCACAGGGGAGATATTGGAGATAGTGGCTGGAGCTGAAGCATTAACTCAGTTTTGA 1137 0.4459 MCSFTVINGISAKPSLSISFSVPVHFQQSRFLRVPSVLFPKNPSQSSFHAPIHCGLREFRERIETVKNTQKITEAMKLVAAARVRRAQEAVINGRPFSETLVEVLYDINVRLQGEDIDVPLTNVRPVKKVALVVITADRGLCGGFNKAVTKKAETRIEELKNLGLDYTIISVGKKGNSYFRRRPYIPVDRFIEGGVFPTTKEAQAIADDVFSMFVSEEVDKIELVYSKFVSLVKSDPVIHTLLPLSPKGEVRDVNGNYVDAPQDEFFRLTTKEGKLTVERDRGKERRTELSPLMQFEQDPVQILDAMMPLYLNSQILRALQESLASELAARMAAMSNATDNAIELKKNLSVAYNRERQAKITGEILEIVAGAEALTQF 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2044 378 FunFam ATP synthase gamma chain, chloroplastic 272 375 - -
Glsi10g2044 378 Hamap ATP synthase gamma chain [atpG]. 53 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 FunFam ATP synthase gamma chain, chloroplastic 123 246 - -
Glsi10g2044 378 PANTHER ATP SYNTHASE GAMMA CHAIN 25 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 ProSitePatterns ATP synthase gamma subunit signature. 361 374 IPR023632 -
Glsi10g2044 378 Pfam ATP synthase 56 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 Gene3D ATP synthase, gamma subunit, helix hairpin domain 277 375 - -
Glsi10g2044 378 Gene3D ATP synthase, gamma subunit, helix hairpin domain 54 120 - -
Glsi10g2044 378 FunFam ATP synthase gamma chain, chloroplastic 54 121 - -
Glsi10g2044 378 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 55 375 IPR035968 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 CDD F1-ATPase_gamma 56 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 Gene3D - 121 246 - -
Glsi10g2044 378 NCBIfam ATP synthase F1 subunit gamma 55 375 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 PRINTS ATP synthase gamma subunit signature 220 237 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 PRINTS ATP synthase gamma subunit signature 127 146 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 PRINTS ATP synthase gamma subunit signature 353 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Glsi10g2044 378 PRINTS ATP synthase gamma subunit signature 322 341 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2044 Glsi-ChrGlsi10 14680337 14681473 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2044 42 375 Primary Pumps ATPases AT1G15700 74.412 5.33e-180 503