Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2026 ATGTGGGATTGGTATCATCGGTGGGTCGTGTTTTGCTTTGTATGCATATTTTTTTCTCTGCAACTGAGAAGGGTTTCTTCAAGCTCTCCTAGTCTACCCACTGATCATGGTTATAAAGATTCAACTTCAGGAAGAACTTTGAGTCAGGAGCAGGTTGGTGATCATGAAATACATTGCTCTAGAGAAAGAAGTAGAGCAGCATGGAAGATAATTGAGGAGTACTTGATGCCCTTTGTGGAGAAAGAACGATATGAAATCTCAAAAAAGTGTAGGCTTCACCCTGACAACGATCTATATAGAGATCAGGAACAACATAAGTTTCATATAGATATAAATGAATGGCAGTGCGGGTACTGTAAGAAAAGTTTCTACGAGGAGAAACATCTTGATCAGCATTTTGACAACAGACACTCCAATTTACTGAATCTGAGTCAAAGAAAGTGCTTGGCAGATGCATGCGGTGCACTGCATTGTGACCTAATAATGAATTCTGGGTCAAAAAAATCAAAGTGCAATCCAGCAGCTGCTGCAAGGAACAAACATCTGTGTGAGAGCTTAGCTGATAGTTGTTTTCCGGTCAGTGAGGGTCCTGCAGCAGGCCGACTTCATGAATTCTTCTTGCGCCAATTCTGTGATGCGCACACCTGCACTGGAGGTCAGAAACCCTTCTCCAGAGGGCGCAAGAAGAAAATGAATGTGCTCTACCTCATTGTTTCCATTTTGGTAGTGATGCTGCTCATACTTTTCTATCTCTATGTTTACTTGTATCAGAGAGGAATGAGAAGGGGCACACAAGTGCTGAAGCGCATCTCACGGATCAACCGAAAGAAAAAGCCCTCTTGA 843 0.4259 MWDWYHRWVVFCFVCIFFSLQLRRVSSSSPSLPTDHGYKDSTSGRTLSQEQVGDHEIHCSRERSRAAWKIIEEYLMPFVEKERYEISKKCRLHPDNDLYRDQEQHKFHIDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNLSQRKCLADACGALHCDLIMNSGSKKSKCNPAAAARNKHLCESLADSCFPVSEGPAAGRLHEFFLRQFCDAHTCTGGQKPFSRGRKKKMNVLYLIVSILVVMLLILFYLYVYLYQRGMRRGTQVLKRISRINRKKKPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2026 280 MobiDBLite consensus disorder prediction 27 50 - -
Glsi10g2026 280 PANTHER ZINC FINGER PROTEIN-RELATED 9 279 - -
Glsi10g2026 280 MobiDBLite consensus disorder prediction 27 51 - -
Glsi10g2026 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Glsi10g2026 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 139 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2026 Glsi-ChrGlsi10 14434804 14439293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2026 37 280 C2H2 Transcription Factor Family AT5G63280 66.260 5.08e-115 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi10g2026 None None None