Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2006 ATGGCGAATTTGCCCCAATCGCTCTCCATGAACGCGCCCTTTGGATCTCCTAGTCCCTCCGCGCAAAACGCCGCTACTCAGGCGAACAAGGATCGGAAGATGGCGTCTGCGGAGCACCTGGTTCTCGAACTCAGCAACCCTGATCTCCGAGAAAATGCTCTTCTCGAGCTCTCCAAGAAGAGGGAGTTATTTCAAGATCTAGCACCATTATTGTGGAATTCGTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCGATATACCCTGTTCTTTCACCACCAAATCTTACTCCCGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGCGTTGCATCTCACCCGGATACAAGGATGCTGTTCCTTAATGCCCATATACCTCTATATCTGTATCCTTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACTAGTCTAGGTGTCATTGGTGCCCTGGTGAAGGTTGATGATACAGAAGTTATCAGTTTTCTTCTTTCAACAGAGATAATTCCACTGTGCCTGCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTTGCGACATTTATAGTTCAAAAAATTTTGTTGGATGATGTGGGCTTGGATTATATCTGTACTACAGCAGAGCGCTTCTTTGCTGTTGGTCGTGTTTTGGCAAACATGGTGACAGCTCTTGCTGAGCAACCCTCATCTCGTCTGTTGAAACATATTATTCGATGTTATCTTCGTCTGTCAGATAATGCAAGGGCTTGTGATGCGCTAAGAAGTTGCCTTCCGGAAATGTTAAAGGATGCTACTTTCAGTAGTTGCCTTCGCGAAGATCCAACAACCAGAAGGTGGCTGCAACAGTTGCTTCATAATGTTGCAGTGAATAGGGTTCCTGCACTACAGGCTGGAGGAGGGTTTGATCATATGATGGTGAACTGA 957 0.4525 MANLPQSLSMNAPFGSPSPSAQNAATQANKDRKMASAEHLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLANMVTALAEQPSSRLLKHIIRCYLRLSDNARACDALRSCLPEMLKDATFSSCLREDPTTRRWLQQLLHNVAVNRVPALQAGGGFDHMMVN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2006 318 PANTHER UNCHARACTERIZED 28 301 IPR007216 GO:0006402|GO:0030014
Glsi10g2006 318 FunFam Cell differentiation protein RCD1 30 301 - -
Glsi10g2006 318 Gene3D - 28 300 IPR011989 -
Glsi10g2006 318 Pfam Cell differentiation family, Rcd1-like 40 298 - -
Glsi10g2006 318 MobiDBLite consensus disorder prediction 1 32 - -
Glsi10g2006 318 SUPERFAMILY ARM repeat 42 205 IPR016024 -
Glsi10g2006 318 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2006 Glsi-ChrGlsi10 14269290 14274471 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Glsi10g2006 Rcd1 7.6e-130 No_clan