Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g2001 ATGCCGAGTGCGATCCCAGACCTATCCGACAAAGACGCCGAACCCTTCGTGGAATTCGACCCGACCCGAAGGTACGGCAAATACTCGGAGCTACTAGGAGCCGGAGCAGTGAAAAAGGTATACAGAGCATTCGACCAGGAAGAAGGCATAGAGGTGGCATGGAACCAGGTGAAGCTTCGAAACTTCTCGGACGACCCAGCGATGGTGGATAGGCTCTTCTCGGAGGTCCGATTACTCAGAAGTCTAGCCGACAAGAACATCATAGCCCTGTACAATGTTTGGAGGGACGAGGAACGAGACACGCTGAACTTCATCACGGAGGTTTGTACCAGTGGGAATCTGAGGGAGTACAGGAAGAAGCACAAGCATGTCTCCATGAAGGCCTTAAAAAAGTGGTCTATGCAGATTCTGAAAGGGTTGAACTACTTGCATTTGCATGAGCCTTGCATAATTCACAGAGACCTCAACTGCAGCAATGTTTTTGTCAATGGGCACAGTGGTCAGGTCAAGATTGGAGACTTGGGTTTGGCAGCAATAGTGGGGAGGAGCCACTGCGCCCATTCAATTCTCGGCACACCGGAATTCATGGCGCCGGAATTATACGATGAAGACTACACCGAGATGGTGGACATATACTCGTTCGGCATGTTGGTGTTAGAGATGGTGACACTAGAGATTCCTTATAGCGAGTGTGACAATGTTGCAAAGATCTACAAGAAGGTGAGTTCAGGGATAAGGCCTCAAGCATTAAACAAGGTTAAAGATGAAGAAGTAAAAGCTTTCATAGAAAGGTGCCTTGCTCAGCCAAGGGCAAGACCTTCTGCTGCTGAGCTTCTCAAGGATTCTTTCTTTGATGATATAGTCAACGACGACGACGATGATGATGAAAATGATCAATCTCTTCCTTCATAG 912 0.4803 MPSAIPDLSDKDAEPFVEFDPTRRYGKYSELLGAGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLFSEVRLLRSLADKNIIALYNVWRDEERDTLNFITEVCTSGNLREYRKKHKHVSMKALKKWSMQILKGLNYLHLHEPCIIHRDLNCSNVFVNGHSGQVKIGDLGLAAIVGRSHCAHSILGTPEFMAPELYDEDYTEMVDIYSFGMLVLEMVTLEIPYSECDNVAKIYKKVSSGIRPQALNKVKDEEVKAFIERCLAQPRARPSAAELLKDSFFDDIVNDDDDDDENDQSLPS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g2001 303 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 286 - -
Glsi10g2001 303 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Glsi10g2001 303 PIRSF TyrPK_CSF1-R 23 131 - -
Glsi10g2001 303 PIRSF TyrPK_CSF1-R 110 300 - -
Glsi10g2001 303 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2001 303 CDD STKc_WNK 24 284 - -
Glsi10g2001 303 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Glsi10g2001 303 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Glsi10g2001 303 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Glsi10g2001 303 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi10g2001 303 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g2001 Glsi-ChrGlsi10 14227494 14229530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g2001 10 288 MAP Kinase Kinase Kinase AT5G55560 80.287 3.81e-175 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi10g2001 Pkinase 4e-52 CL0016