Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1993 ATGGGTATCTCTCGTGATTCCATGCACAAAAGGCGAGCCACCGGAGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTATGAACTTGGGAGGCAACCAGCAAACACAAAACTATCAAGCAACAAAACAGTTAGGAGGATTAGGGTTCGAGGTGGTAATGTGAAGTGGCGTGCTTTGAGGCTTGATACTGGAAATTATTCTTGGGGAAGTGAAGCTGTGACTCGCAAAACCAGAATTCTTGATGTGGTGTACAATGCATCTAACAATGAGCTGGTTCGTACTCAGACTTTGGTCAAGGGTGCTATTGTTCAGGTTGATGCTGCACCTTTCAAGCAGTGGTATCTCCAACATTATGGCGTTGATGTTGGTCGCAAGAAGAAGAGTGCAACTTCTGCCAAGAAAGAAGGGGAGGATGGTGAAACTGCAACCGAGGAAGTGAAAAAGAGCAGCCATGTATTGAGAAAGCTAGAGAAGCGTCAACAGAACCGGAAGCTTGATTCTCATATTGAAGAACAATTTGGAGGCGGTCGTCTGTTGGCTTGTATTGCATCCCGTCCTGGTCAATGTGGTCGTGCCGATGGATATATATTGGAGGGCAAAGAGCTGGAGTTCTATATGAAGAAGCTTCAAAGGAAGAAGGGCAAGGGAGCAAGTGGTGCTGCCTGA 666 0.4655 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKGAIVQVDAAPFKQWYLQHYGVDVGRKKKSATSAKKEGEDGETATEEVKKSSHVLRKLEKRQQNRKLDSHIEEQFGGGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASGAA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1993 221 Gene3D - 32 161 - -
Glsi10g1993 221 Gene3D - 162 215 - -
Glsi10g1993 221 FunFam 40S ribosomal protein S8 162 215 - -
Glsi10g1993 221 FunFam 40S ribosomal protein S8 109 176 - -
Glsi10g1993 221 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Glsi10g1993 221 MobiDBLite consensus disorder prediction 11 26 - -
Glsi10g1993 221 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Glsi10g1993 221 CDD Ribosomal_S8e_like 5 197 - -
Glsi10g1993 221 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Glsi10g1993 221 FunFam 40S ribosomal protein S8 32 161 - -
Glsi10g1993 221 MobiDBLite consensus disorder prediction 1 41 - -
Glsi10g1993 221 MobiDBLite consensus disorder prediction 125 151 - -
Glsi10g1993 221 Pfam Ribosomal protein S8e 5 197 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1993 Glsi-ChrGlsi10 14168541 14171481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1993 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.437 1.28e-126 354