Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1990 ATGCCCACCTTCCTCTATATACATTTAACCAAAGTCTTTCCTCACATTTTCTGCAGAAATCAGAATACTACAGTTTCTTTTTTGTCTTTCTTTGATTTGCACCTGTTTTACAAAATGCCCGAGGGAGAAATTTGCAGTTCATTGAAGGAGCCTCGTCTTGTGGCGAGGAAATTCTTGGCCAGGCCTCAACGCGAAGGTGTTGGGGCTGTTGTTAGAAGAAGCATAGGACGGTTTGAGCTGAAGTATTTTGATCCTTTCCTTATCTTGGATGAATTCTCAGTCACTGCTCCTGCTGGCTTCCCTGATCATCCACATAGAGGGTTTGAGACAGTCACCTACATGTTGCAGGGAGCCGTCACACATGAAGATTTTGAAGGACATAAGGGAACTATAGAAGCCGGTGACTTGCAGTGGATGACTGCAGGGAGAGGGATTGTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTTTGCAGCTGTGGATCAACCTTTCTTCCAAAAATAAAATGATTGAACCAAGGTATCAAGAACTGTTGAGCAAGGACATAGCAGAAGCTGTGGAAGATGGCATAAAGGTGAGGGTTATAGCTGGAGAAGCCCTGGGAATAAAGTCCCCAATCTACACAAGGACCCCAACCATGTACTTAGACTTCTCTCTAAAACCTGGAGCTCACTTGCAACAACCTATACCAAAATCATGGAATGCTTTTGCCTATATCTTGGAAGGAGAGGGTGTGTTTGGCAACCTGAAATCTCAGCCTGCAACTTCCCACCATATTCTTCTTCTTGGTCCTGGAGATGGCCTAGAGGCATGGAACAAATCTTCTAAGCCCCTTAGGTTCGTTCTAATTGGAGGAGAACCACTGGGTGAGCCTGTGGTTCAGTTTGGACCCTTTGTGATGAATACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAACTTCGTCAATGGGTTTGAAAAAGCCAGGCACTGGAGGTCTGAAGCTGTAATTTAG 1008 0.4474 MPTFLYIHLTKVFPHIFCRNQNTTVSFLSFFDLHLFYKMPEGEICSSLKEPRLVARKFLARPQREGVGAVVRRSIGRFELKYFDPFLILDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPRYQELLSKDIAEAVEDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQPIPKSWNAFAYILEGEGVFGNLKSQPATSHHILLLGPGDGLEAWNKSSKPLRFVLIGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENFVNGFEKARHWRSEAVI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1990 335 CDD cupin_pirin_C 214 290 - -
Glsi10g1990 335 Pfam Pirin 71 164 IPR003829 -
Glsi10g1990 335 Gene3D Jelly Rolls 186 291 IPR014710 -
Glsi10g1990 335 Gene3D Jelly Rolls 65 317 IPR014710 -
Glsi10g1990 335 PANTHER PIRIN-RELATED 46 333 IPR012093 -
Glsi10g1990 335 PIRSF Pirin 50 330 IPR012093 -
Glsi10g1990 335 CDD cupin_pirin_N 69 166 - -
Glsi10g1990 335 Pfam Pirin C-terminal cupin domain 217 320 IPR008778 -
Glsi10g1990 335 SUPERFAMILY RmlC-like cupins 52 331 IPR011051 -
Glsi10g1990 335 FunFam pirin 65 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1990 Glsi-ChrGlsi10 14154836 14158001 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1990 51 327 Calmodulin-binding Proteins AT3G59220 61.649 3.37e-129 369