Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g1988 ATGGAGATATTGAATTGGATATCTGACGCTGCGAAGAACCACGAGCACGCACAGGTGGTACCCATTTCGCTCTTCGTGGCGGTTCTCTGCCTCTGCTTGCTCATCGGTCACTTGTTCGAAGAAAACCGTTGGGTTAATGAATCCATCACTGCCATTCTAGTTGGATGCCTTTCAGGAATGATAATTTTGTTTATCACCAAGGGGAAAAGCTCTCACATCCTTACGTTTGATGAAGAACTATTCTTCATATATCTCCTGCCACCTATAATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTTTTAACCATCATGCTGTTTGGGGTGATTGGTGTTTTTATTTCAGCAACTGTTATTACATCTGGCAGCTGGTGGCTATTCCCTAAGTTAAACTTTCTTGGTCTGACTGGGCGAGATTATCTTGGTGAGATCCTTGTATCTTCTCAATCCATAGGAACCATTTTCTCTTCAACAGACACAGTTTGTACCCTGCAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGTCTAGTCTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTCGTTCTATTCAATGCAGTGCAAAAGCTTGATATTTCAGGACTAAATGGTAGGGCACTCCGTGTCATTGGAGATTTCTTGTATCTATTCTCAACAAGCACTGCTCTAGGATTCGTCGCTGGACTCCTCACAGCATACATCTTGAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTTTTGATGGCATACCTATCTTACATGTTGTCAGAGCTACTAGGACTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAGTACTAATGTCACATTATGCGTGGCATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTCTTTGCAACAATGTCATTTATTGCAGAAACCTTTATATTTCTTTATGTGGGCATGGATGCTCTTGACATTGAAAAGTGGAGAATGACCAAATTAAGTTTTGGTAGTTTGATGGGAATTTACAGTTGCTTAATCTTCTTGATATTGCTTGGGCGGGCTGCATTTGTATTCCCTCTATCTGCTTTTGCCAATTGTATGAATAGGCGTGCTGAGAGATCAGCAAGTATCACATTTAAGCATCAGATAATCATTTGGTGGGCTGGACTTATGAGGGGAGCAGTTTCCATAGCTCTGGCTTTCAAACAGTTCACATTTTCTGGAGTTACATCTGAACCTGTCAATGCAACAATGATTACCAACACCATTATCGTTGTACTTTTCAGTACGCTGGTTTTTGGTTTTCTCACAAAACCACTGATTCGATATCTTCTTCCCCACAATGCAACGAGGAAAAACATCAGCCATGAAGAATCCGGCCCACTTCCCGAGGACTTGAATCTGCCTTTGCTATCCTTTGAGGAGTCAGCAGCAACCAACATCAGCCGTGCGAAGGAAAGTTTGTCCATGTTGATAGAAAGTCCTGTATACACCATACATTATTATTGGAGGAAGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTAGTCAGTCACAGTGCTAG 1596 0.4167 MEILNWISDAAKNHEHAQVVPISLFVAVLCLCLLIGHLFEENRWVNESITAILVGCLSGMIILFITKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISATVITSGSWWLFPKLNFLGLTGRDYLGEILVSSQSIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDISGLNGRALRVIGDFLYLFSTSTALGFVAGLLTAYILKALSFGRHSSVREIALMVLMAYLSYMLSELLGLSGILTVFFCGVLMSHYAWHNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWRMTKLSFGSLMGIYSCLIFLILLGRAAFVFPLSAFANCMNRRAERSASITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSEPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHNATRKNISHEESGPLPEDLNLPLLSFEESAATNISRAKESLSMLIESPVYTIHYYWRKFDDAYMRPIFGGPLASQSQC 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g1988 531 Pfam Sodium/hydrogen exchanger family 26 447 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi10g1988 531 PANTHER SODIUM/HYDROGEN EXCHANGER 11 521 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Glsi10g1988 531 Gene3D - 152 201 - -
Glsi10g1988 531 PRINTS Na+/H+ exchanger signature 80 91 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi10g1988 531 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi10g1988 531 PRINTS Na+/H+ exchanger signature 109 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Glsi10g1988 531 PRINTS Na+/H+ exchanger signature 94 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g1988 Glsi-ChrGlsi10 14116122 14121304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g1988 15 531 Antiporters AT5G55470 72.989 0.0 776